Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0050.Seq
         (669 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1444|AAS64658.1| 1679|Drosophila melanogaster CG8086-PD...    32   0.81 
AY051452-1|AAK92876.1|  426|Drosophila melanogaster GH11964p pro...    30   2.5  
AE014134-1445|AAS64659.1|  534|Drosophila melanogaster CG8086-PC...    30   2.5  

>AE014134-1444|AAS64658.1| 1679|Drosophila melanogaster CG8086-PD,
           isoform D protein.
          Length = 1679

 Score = 31.9 bits (69), Expect = 0.81
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = +1

Query: 244 NAWPGTYXTDXXAAAXTKRPPAFTMAPRRELKPPTAAVPGXGXYCPXKV 390
           N  PG Y     A A     P +T   +R +   T  +P  G YCP KV
Sbjct: 128 NPGPGEYDVVPAAKAVIDATPKYTFG-QRPVALKTFQIPAPGAYCPEKV 175



 Score = 30.3 bits (65), Expect = 2.5
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +1

Query: 304 PAFTMAPRRELKPPTAAVPGXGXYCPXKV 390
           PAF+ A R +L  P    P  G YCP KV
Sbjct: 775 PAFSFAGRHDLHKPNDT-PAPGAYCPEKV 802



 Score = 30.3 bits (65), Expect = 2.5
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +1

Query: 10   HPKPCDYEPNKAARAVLDHAPRF 78
            HP PCDY P K     LDH P +
Sbjct: 1220 HPAPCDYAPEKVR---LDHTPAY 1239



 Score = 29.1 bits (62), Expect = 5.7
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +1

Query: 253 PGTYXTDXXAAAXTKRPPAFTMAPRRELKPPTAAVPGXGXYCPXKV 390
           PG+Y  +        R PAFT   + E +  ++  P  G YCP KV
Sbjct: 332 PGSYAPEKYR---NDRTPAFTFGGKHEQRLESST-PAPGDYCPEKV 373



 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 304 PAFTMAPRRELKPPTAAVPGXGXYCPXKV 390
           PAF+MA +   K  T+  P  G YCP KV
Sbjct: 445 PAFSMAGKHSQKV-TSDSPAPGDYCPEKV 472


>AY051452-1|AAK92876.1|  426|Drosophila melanogaster GH11964p
           protein.
          Length = 426

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +1

Query: 10  HPKPCDYEPNKAARAVLDHAPRF 78
           HP PCDY P K     LDH P +
Sbjct: 112 HPAPCDYAPEKVR---LDHTPAY 131


>AE014134-1445|AAS64659.1|  534|Drosophila melanogaster CG8086-PC,
           isoform C protein.
          Length = 534

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +1

Query: 10  HPKPCDYEPNKAARAVLDHAPRF 78
           HP PCDY P K     LDH P +
Sbjct: 112 HPAPCDYAPEKVR---LDHTPAY 131



 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +1

Query: 250 WPGTYXTDXXAAAXTKRPPAFTMAPRRELKPPTAAVPGXGXYCPXKV 390
           +PG    D        +PP F+M  + ++    +  PG G +CP KV
Sbjct: 453 FPGPGYYDGEYTVVKPKPPVFSMRGKYKMGSEDSK-PGPGAHCPEKV 498


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,328,559
Number of Sequences: 53049
Number of extensions: 479365
Number of successful extensions: 1012
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)