Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0044.Seq
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   3.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   6.0  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   7.9  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 148 YXGLLF*X*PSYFGGFSXXGILFATQYC 231
           Y  LL    P+YFG      +L   +YC
Sbjct: 295 YVSLLLGPHPTYFGKTGRKTVLKTNKYC 322


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 536 SXVPLNXRINKIVYRLF 486
           S  PLN   N I+Y LF
Sbjct: 294 SLAPLNSAANPIIYCLF 310


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 536 SXVPLNXRINKIVYRLF 486
           S  PLN   N ++Y LF
Sbjct: 329 SLAPLNSAANPVIYCLF 345


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,863
Number of Sequences: 336
Number of extensions: 1128
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)