Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0025.Seq
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.6  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   8.7  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   8.7  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 312 PASTSGAGXKTWPH 353
           P  +SG G K W H
Sbjct: 72  PRFSSGVGRKAWKH 85


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 312 PASTSGAGXKTWPH 353
           P  +SG G K W H
Sbjct: 72  PRFSSGVGRKAWKH 85


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/12 (50%), Positives = 12/12 (100%)
 Frame = +1

Query: 166 LPKIPTTRFLLS 201
           LP++P++RFL++
Sbjct: 57  LPEVPSSRFLMN 68


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/12 (50%), Positives = 12/12 (100%)
 Frame = +1

Query: 166 LPKIPTTRFLLS 201
           LP++P++RFL++
Sbjct: 57  LPEVPSSRFLMN 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,220
Number of Sequences: 336
Number of extensions: 2182
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)