Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1535
(598 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 157 6e-39
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 153 8e-38
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 41 7e-04
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 41 9e-04
11_01_0617 - 4939108-4939259,4939584-4940259 31 0.92
09_02_0476 + 9728729-9730739,9730930-9730991 31 0.92
11_04_0032 + 12545208-12545954 29 2.1
01_01_0930 + 7347680-7347886,7348030-7348082,7348175-7348247,734... 29 2.1
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 29 2.8
04_04_0028 - 22243272-22243577,22244564-22244713,22244919-222456... 29 2.8
02_05_1006 + 33448476-33448915,33449016-33449083,33449681-334497... 28 6.5
12_02_0928 + 24488891-24489675,24490369-24490421,24490479-244912... 27 8.6
11_06_0690 + 26303733-26306540 27 8.6
11_06_0092 + 19973364-19975983,19976272-19976648 27 8.6
08_01_0005 + 47929-48201,48663-48788,49009-49054,49188-49270,496... 27 8.6
06_01_0193 - 1491710-1491739,1492194-1492319,1492631-1492766,149... 27 8.6
02_01_0299 + 2001938-2002510,2002821-2003033,2003129-2003333,200... 27 8.6
01_07_0075 + 40908875-40909069,40909147-40909215,40909363-409094... 27 8.6
01_06_0813 - 32165310-32165546,32165691-32165783,32166075-321662... 27 8.6
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 157 bits (381), Expect = 6e-39
Identities = 90/182 (49%), Positives = 112/182 (61%), Gaps = 5/182 (2%)
Frame = +3
Query: 66 MASKGGLRTIANEENEERFGYVFAVSGPXVTAEKMSGSAMYELVRVGYNELVGEIIRLEG 245
MA + T + E E +GYV VSGP V A+ M G+AMYELVRVG++ L+GEIIRLEG
Sbjct: 1 MAFGDRITTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEG 60
Query: 246 DMAPSRYTEETSGVTVGDPVLRTGK-----PLSVELGPGILGSIFDGIQRPLKDINXLTQ 410
D A + EET+G+ V DPVLRT K PLSVELGPGILG+IFDGIQRPLK I +
Sbjct: 61 DSATIQVYEETAGLMVNDPVLRTRKVMPAQPLSVELGPGILGNIFDGIQRPLKTIAIKSG 120
Query: 411 VHLHPQGYXRAFPXXXXXXXI*PIKC*GRVPHHGGDLYGIGHENTLVKHRMLVPPKAXGT 590
P+G P K GGDLY I +ENTL++H++ +PP A G
Sbjct: 121 DVYIPRGVSVPALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALPPGAMGK 180
Query: 591 VT 596
++
Sbjct: 181 IS 182
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 153 bits (372), Expect = 8e-38
Identities = 85/160 (53%), Positives = 101/160 (63%)
Frame = +3
Query: 117 RFGYVFAVSGPXVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMAPSRYTEETSGVTVG 296
R G V AVSGP V A+ M G+AMYELVRVG + L+GEIIRLEGD A + EET+G+ V
Sbjct: 56 RIGGVLAVSGPVVVADGMGGAAMYELVRVGNDNLIGEIIRLEGDSATIQVYEETAGLMVN 115
Query: 297 DPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINXLTQVHLHPQGYXRAFPXXXXXXXI* 476
DPVLRT KPLSVELGPGILG+IFDGIQRPLK I + P+G
Sbjct: 116 DPVLRTRKPLSVELGPGILGNIFDGIQRPLKTIAIKSGDVYIPRGVSVPALDKDQLWDFE 175
Query: 477 PIKC*GRVPHHGGDLYGIGHENTLVKHRMLVPPKAXGTVT 596
P K GGDLY ENTL+KH + +PP + G ++
Sbjct: 176 PKKLGVGDAITGGDLYATVFENTLMKHHVALPPGSMGKIS 215
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 41.1 bits (92), Expect = 7e-04
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Frame = +3
Query: 129 VFAVSGPXVTAEKMSGSAMYELVRVGYNELV---GEIIRLEGDMAPSRYTEETSGVTVGD 299
V V+GP V +K+ G E+V + + G+++ ++G+ A + E TSG+
Sbjct: 64 VSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKY 123
Query: 300 PVLR-TGKPLSVELGPGILGSIFDGIQRPL 386
++ TG+ L + +LG IF+G +P+
Sbjct: 124 TTVQFTGEVLKTPVSLDMLGRIFNGSGKPI 153
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 40.7 bits (91), Expect = 9e-04
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Frame = +3
Query: 129 VFAVSGPXVTAEKMSGSAMYELVRVGYNELV---GEIIRLEGDMAPSRYTEETSGVTVGD 299
V V+GP V +K+ G E+V + + G+++ ++G+ A + E TSG+
Sbjct: 24 VSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKY 83
Query: 300 PVLR-TGKPLSVELGPGILGSIFDGIQRPL 386
++ TG+ L + +LG +F+G +P+
Sbjct: 84 TTVQFTGEVLKTPVSLDMLGRVFNGSGKPI 113
>11_01_0617 - 4939108-4939259,4939584-4940259
Length = 275
Score = 30.7 bits (66), Expect = 0.92
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +3
Query: 84 LRTIANEENEERFGYVFAVSGPXVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMA 254
L +A EE+EER G F V+ +A+++ VR+G LVG ++ + +A
Sbjct: 116 LLDMAMEEDEERGGARFRVADVLEKQNGRRETALHDAVRLGDERLVGHLMAVHPRLA 172
>09_02_0476 + 9728729-9730739,9730930-9730991
Length = 690
Score = 30.7 bits (66), Expect = 0.92
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 359 HL*RYSASPQGHQXADSSPSTSPRVXTCLPWSGRLTGNLTH*MLRXGP-TSRWRFVWYWT 535
HL R +ASP A S PS SP++ + L ++ L P T++ FV YW
Sbjct: 20 HLPRSAASPSWSDAAVSPPSPSPQLCPMMQQRSVLPPRVSE--LPASPFTAKAAFVRYWN 77
Query: 536 RE-HSGQ 553
R+ HS +
Sbjct: 78 RKVHSNR 84
>11_04_0032 + 12545208-12545954
Length = 248
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -2
Query: 273 LRYTWMGPCHLQDG*SHRRVH-CNRHG 196
LR WMGPC + D SH V CN G
Sbjct: 181 LRSKWMGPCTVIDASSHGAVTLCNNEG 207
>01_01_0930 +
7347680-7347886,7348030-7348082,7348175-7348247,
7348493-7348594,7348697-7348798,7348888-7348959,
7349067-7349129,7349210-7349251,7349620-7349679,
7349755-7349865,7350044-7350214,7350392-7350482,
7350571-7350845
Length = 473
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 225 EIIRLEGDMAPSRYTEETSGVTVGDPVLRTGKPLSVELGPGI 350
E +R+ GD A YT + V + D V+R VEL P +
Sbjct: 75 EDVRMRGDAAVKDYTVKFDKVALDDVVVRVSDLPDVELDPAV 116
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 162 EKMSGSAMYELVRVGYNELVGEIIRLEGDMAPSRYTEETSGVTVGDPVLRTGKPLSVE 335
EKMS + EL+ +GYN+L G I M + ++ +G + G LS++
Sbjct: 469 EKMSNLSSLELIDLGYNQLTGAIPESIATMGNLGLLDVSNNHILGPLPTQIGTLLSIQ 526
>04_04_0028 -
22243272-22243577,22244564-22244713,22244919-22245656,
22247233-22247331,22247541-22247933,22248806-22248961
Length = 613
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 154 SLPKRCPDLLCTSWSVSVTMNSSVRLSVLKVTW 252
+ P CPDL+CT S + ++R SVL W
Sbjct: 210 AFPGCCPDLICTILS-KLPQKEAIRTSVLSSKW 241
>02_05_1006 +
33448476-33448915,33449016-33449083,33449681-33449751,
33449905-33450156,33450473-33450636,33450731-33450773,
33451044-33451161,33451384-33451481,33451550-33451594
Length = 432
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1
Query: 502 GTRP*HLMG*IPSQPP*PGKAR 437
G RP MG PS PP PG++R
Sbjct: 33 GRRPASAMGQAPSSPPGPGRSR 54
>12_02_0928 +
24488891-24489675,24490369-24490421,24490479-24491229,
24491322-24491533,24491780-24492570,24492686-24492784
Length = 896
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 589 VPLALGGTNILCLTRVFSCPIPYKSPP 509
+P LG + L + RV++CP ++ PP
Sbjct: 756 LPYELGKLHCLSILRVYACPALWRLPP 782
>11_06_0690 + 26303733-26306540
Length = 935
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 131 DISEPLLILLIGDRPQTAFARHFELVILYPRRERWKRRTENG 6
D + PL + L+G RP+ + R + V+ Y R + +NG
Sbjct: 827 DFAAPLTMALLGRRPRPSRVRQRQQVVPYSPRRSNRLAAKNG 868
>11_06_0092 + 19973364-19975983,19976272-19976648
Length = 998
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 270 EETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPL 386
E +G+ D RTG L + PG+ G + D + R L
Sbjct: 896 ETVTGMRPADSTFRTGLSLRQYVEPGLHGRLMDVVDRKL 934
>08_01_0005 +
47929-48201,48663-48788,49009-49054,49188-49270,
49651-49728,49831-49884,50004-50138,50222-51691
Length = 754
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 105 ENEERFGYVFAVSGPXVTAEKMSGSAMYELVRVGYNELVGEIIRLE-GDMAPSRY 266
ENE + EK + M EL+ + E++GEI+ L G AP Y
Sbjct: 110 ENEGSISTARGSNSDGANNEKENVQGMVELLELERREIIGEILHLNPGYKAPEDY 164
>06_01_0193 -
1491710-1491739,1492194-1492319,1492631-1492766,
1493048-1493112,1493213-1493305,1493433-1493498,
1493763-1493843,1493977-1494032,1494692-1494780,
1495340-1495425,1495531-1495647,1496109-1496254,
1496665-1496725,1496831-1496914,1497028-1497135,
1497286-1497388,1497802-1497845,1498100-1498584,
1499417-1499603,1500150-1500362,1501066-1501323
Length = 877
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 249 MAPSRYTEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINXLTQV 413
M S Y + +TVGD V+ G + L LGS++ ++ L D+ + Q+
Sbjct: 546 MVLSSYGVMSGALTVGDLVMVNGLLFQLSLPLNFLGSVYRESRQSLIDMKSMFQL 600
>02_01_0299 +
2001938-2002510,2002821-2003033,2003129-2003333,
2003485-2003560,2003665-2003800,2003905-2004009,
2004095-2004172,2004264-2004353,2004441-2004506,
2004836-2004892,2004996-2005073,2005165-2005212,
2005330-2005401
Length = 598
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +3
Query: 63 KMASKGGLRTIANEENEERFGYVFAVSGPXVTAEKMSGSAMYELVRVGYNELVGEII 233
K + G + T+A+ E EE+ G +F GP + + G+ ++ VG +G I+
Sbjct: 124 KFSRLGQMSTVASPEQEEQEGVLFRGGGP-MCDFAVPGAQDTTVLVVGATSRIGRIV 179
>01_07_0075 +
40908875-40909069,40909147-40909215,40909363-40909461,
40909999-40910078,40910162-40910444,40910557-40910580,
40911039-40911700,40912037-40912121,40912203-40912254,
40912336-40912385,40912450-40912497,40912590-40912766
Length = 607
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 60 FKMASKGGLRTIANEENEERFGYVFAVSGPXVTA 161
+ + S+ G + AN+E+E R Y +SG +TA
Sbjct: 358 YGLGSRNGQQPFANDESEPRVDYNGDISGDGLTA 391
>01_06_0813 -
32165310-32165546,32165691-32165783,32166075-32166218,
32166685-32166771,32166858-32167077,32167879-32168039
Length = 313
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 218 EFIVTDTDQLVHSRSGHLFGSDXGSRYGEDISEPLL 111
EF+V +T++L H + G D + ED+ EPLL
Sbjct: 115 EFMVRETEKL-HQQVGRYKSPDEHPFFPEDLPEPLL 149
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,746,940
Number of Sequences: 37544
Number of extensions: 378884
Number of successful extensions: 943
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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