Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1535
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical ...   192   2e-49
U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase su...    36   0.029
AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical ...    31   0.62 
AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical ...    31   0.62 
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z78415-5|CAB01670.1|  925|Caenorhabditis elegans Hypothetical pr...    28   4.4  
L17337-1|AAP68928.1|  593|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical
           protein Y49A3A.2 protein.
          Length = 606

 Score =  192 bits (467), Expect = 2e-49
 Identities = 101/165 (61%), Positives = 119/165 (72%), Gaps = 3/165 (1%)
 Frame = +3

Query: 111 EERFGYVFAVSGPXVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMAPSRYTEETSGVT 290
           E  +G+V+ VSGP VTAEKM+GSAMYELVRVG+ ELVGEIIRLEGD A  +  EETSGVT
Sbjct: 4   ESSYGFVYGVSGPVVTAEKMAGSAMYELVRVGHQELVGEIIRLEGDYATIQVYEETSGVT 63

Query: 291 VGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDINXLTQVHLHPQGY-XRAFPXXXXXX 467
           +GDPVLRTGKPLSVELGPGI+GSIFDGIQRPLKDI  +TQ    P+G    A        
Sbjct: 64  IGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKDIADITQSIYIPKGVSTNALSREARWD 123

Query: 468 XI*PIKC*GRVPHH--GGDLYGIGHENTLVKHRMLVPPKAXGTVT 596
            +  +    RV  H  GGD+ G   EN L+KH++L+PP A GT+T
Sbjct: 124 FV--VSKDLRVGGHVTGGDIIGTVDENLLIKHKILLPPSACGTIT 166


>U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase
           subunit protein 2 protein.
          Length = 538

 Score = 35.5 bits (78), Expect = 0.029
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 276 TSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKD 392
           T G+  G PV  TG P+ + +GP  LG I + I  P+ +
Sbjct: 125 TEGLVRGQPVADTGDPIKIPVGPETLGRIMNVIGEPIDE 163


>AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical
           protein H28O16.1d protein.
          Length = 511

 Score = 31.1 bits (67), Expect = 0.62
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 294 GDPVLRTGKPLSVELGPGILGSIFDGIQRPL 386
           GD V RTG  + V +G G+LG + D +  P+
Sbjct: 86  GDIVKRTGAIVDVPVGDGLLGRVVDALGNPI 116


>AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical
           protein H28O16.1a protein.
          Length = 538

 Score = 31.1 bits (67), Expect = 0.62
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 294 GDPVLRTGKPLSVELGPGILGSIFDGIQRPL 386
           GD V RTG  + V +G G+LG + D +  P+
Sbjct: 113 GDIVKRTGAIVDVPVGDGLLGRVVDALGNPI 143


>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical
           protein F25C8.3b protein.
          Length = 3175

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = -3

Query: 566 QHPVLDQSVLVSNTIQISTVMWDPXLTFNGLNSQSTSLTREGTXIPLGM 420
           QHPVL+ S+ +S T   S V     LT       +TS   + T IPL M
Sbjct: 429 QHPVLESSMFLSTTSSASDVP-PFVLTRASTAEDTTSSCSQQTVIPLAM 476


>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical
           protein F25C8.3a protein.
          Length = 3184

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = -3

Query: 566 QHPVLDQSVLVSNTIQISTVMWDPXLTFNGLNSQSTSLTREGTXIPLGM 420
           QHPVL+ S+ +S T   S V     LT       +TS   + T IPL M
Sbjct: 429 QHPVLESSMFLSTTSSASDVP-PFVLTRASTAEDTTSSCSQQTVIPLAM 476


>Z78415-5|CAB01670.1|  925|Caenorhabditis elegans Hypothetical
           protein C17G1.4a protein.
          Length = 925

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -1

Query: 373 IPSKMEPKIPGPSSTDKGFPVRSTGSPTVTPEVSSVYLD 257
           +PS+ +P + GP +   G      G+PT  P V+++ L+
Sbjct: 781 LPSQQQPPMGGPMANHMGGMQPMNGTPTEGPTVNNIGLN 819


>L17337-1|AAP68928.1|  593|Caenorhabditis elegans Hypothetical
           protein ZK686.2 protein.
          Length = 593

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 340 VPVSWVPSLTVFSVPSRTSTS-*LKSIYIPKGXNVPSLV 453
           V  SWV + T FS    +STS  L  I +P+   VPS +
Sbjct: 92  VTSSWVQNATTFSATIDSSTSQKLSQIELPEHLTVPSAI 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,420,210
Number of Sequences: 27780
Number of extensions: 303454
Number of successful extensions: 708
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)