Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1534
         (499 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033588-1|AAH33588.1|  131|Homo sapiens transmembrane protein 3...    44   2e-04
AL953870-2|CAI41375.1|  131|Homo sapiens transmembrane protein 3...    44   2e-04
AL732579-1|CAI39920.2|  131|Homo sapiens transmembrane protein 3...    44   2e-04

>BC033588-1|AAH33588.1|  131|Homo sapiens transmembrane protein 32
           protein.
          Length = 131

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
 Frame = +3

Query: 147 SFHKVIXXIGFLSVFHTAFSATQHRSYLRITSQEFTRYHWILASKLXSVCXLTXGECXMW 326
           S  K +  IG  ++ H AFSA QHRSY+R+T +E       +  +      +T   C   
Sbjct: 4   SLWKGLVGIGLFALAHAAFSAAQHRSYMRLTEKEDESLPIDIVLQTLLAFAVT---CYGI 60

Query: 327 RXIFAKYQ-LLLNXMLSNGRHRTIFXH--FYIFNHRGXAL 437
             I  +++ +     L N    T+  H  FY+FNHRG  L
Sbjct: 61  VHIAGEFKDMDATSELKNKTFDTLRNHPSFYVFNHRGRVL 100



 Score = 33.5 bits (73), Expect = 0.42
 Identities = 16/61 (26%), Positives = 33/61 (54%)
 Frame = +2

Query: 257 LPLDIGIQAXVSLXADMXXVXNVAGNLREIPAAAEXNAIKWETQNNLPSFLYL*SQREXI 436
           LP+DI +Q  ++       + ++AG  +++ A +E     ++T  N PSF Y+ + R  +
Sbjct: 41  LPIDIVLQTLLAFAVTCYGIVHIAGEFKDMDATSELKNKTFDTLRNHPSF-YVFNHRGRV 99

Query: 437 I 439
           +
Sbjct: 100 L 100


>AL953870-2|CAI41375.1|  131|Homo sapiens transmembrane protein 32
           protein.
          Length = 131

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
 Frame = +3

Query: 147 SFHKVIXXIGFLSVFHTAFSATQHRSYLRITSQEFTRYHWILASKLXSVCXLTXGECXMW 326
           S  K +  IG  ++ H AFSA QHRSY+R+T +E       +  +      +T   C   
Sbjct: 4   SLWKGLVGIGLFALAHAAFSAAQHRSYMRLTEKEDESLPIDIVLQTLLAFAVT---CYGI 60

Query: 327 RXIFAKYQ-LLLNXMLSNGRHRTIFXH--FYIFNHRGXAL 437
             I  +++ +     L N    T+  H  FY+FNHRG  L
Sbjct: 61  VHIAGEFKDMDATSELKNKTFDTLRNHPSFYVFNHRGRVL 100



 Score = 33.5 bits (73), Expect = 0.42
 Identities = 16/61 (26%), Positives = 33/61 (54%)
 Frame = +2

Query: 257 LPLDIGIQAXVSLXADMXXVXNVAGNLREIPAAAEXNAIKWETQNNLPSFLYL*SQREXI 436
           LP+DI +Q  ++       + ++AG  +++ A +E     ++T  N PSF Y+ + R  +
Sbjct: 41  LPIDIVLQTLLAFAVTCYGIVHIAGEFKDMDATSELKNKTFDTLRNHPSF-YVFNHRGRV 99

Query: 437 I 439
           +
Sbjct: 100 L 100


>AL732579-1|CAI39920.2|  131|Homo sapiens transmembrane protein 32
           protein.
          Length = 131

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
 Frame = +3

Query: 147 SFHKVIXXIGFLSVFHTAFSATQHRSYLRITSQEFTRYHWILASKLXSVCXLTXGECXMW 326
           S  K +  IG  ++ H AFSA QHRSY+R+T +E       +  +      +T   C   
Sbjct: 4   SLWKGLVGIGLFALAHAAFSAAQHRSYMRLTEKEDESLPIDIVLQTLLAFAVT---CYGI 60

Query: 327 RXIFAKYQ-LLLNXMLSNGRHRTIFXH--FYIFNHRGXAL 437
             I  +++ +     L N    T+  H  FY+FNHRG  L
Sbjct: 61  VHIAGEFKDMDATSELKNKTFDTLRNHPSFYVFNHRGRVL 100



 Score = 33.5 bits (73), Expect = 0.42
 Identities = 16/61 (26%), Positives = 33/61 (54%)
 Frame = +2

Query: 257 LPLDIGIQAXVSLXADMXXVXNVAGNLREIPAAAEXNAIKWETQNNLPSFLYL*SQREXI 436
           LP+DI +Q  ++       + ++AG  +++ A +E     ++T  N PSF Y+ + R  +
Sbjct: 41  LPIDIVLQTLLAFAVTCYGIVHIAGEFKDMDATSELKNKTFDTLRNHPSF-YVFNHRGRV 99

Query: 437 I 439
           +
Sbjct: 100 L 100


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,280,820
Number of Sequences: 237096
Number of extensions: 787104
Number of successful extensions: 2086
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2083
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)