Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1534
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071004-1|AAL48626.1|  109|Drosophila melanogaster RE09053p pro...    50   1e-06
AE014134-3007|AAF53732.1|  109|Drosophila melanogaster CG15168-P...    50   1e-06

>AY071004-1|AAL48626.1|  109|Drosophila melanogaster RE09053p
           protein.
          Length = 109

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
 Frame = +3

Query: 150 FHKVIXXIGFLSVFHTAFSATQHRSYLRITSQEFTRYHW-ILASKLXSVCXLTXGECXMW 326
           F+K++   GF S+ H AFSA  HR+YLR+T QE+      I+   + S+  +      + 
Sbjct: 6   FNKLLLIAGFASLAHAAFSAAHHRTYLRLTEQEWNSLPLDIILQTVISLVIVIYNIIEIV 65

Query: 327 RXIFAKYQLLLNXMLSNGRHRTIFXHFYIFNHRGXALSYXY 449
              F + +  ++           F  FY FNHRG AL+  Y
Sbjct: 66  GN-FKEIRATVDMQQKTWDTLGNFPSFYSFNHRGRALNPGY 105



 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +2

Query: 257 LPLDIGIQAXVSLXADMXXVXNVAGNLREIPAAAEXNAIKWETQNNLPSF 406
           LPLDI +Q  +SL   +  +  + GN +EI A  +     W+T  N PSF
Sbjct: 42  LPLDIILQTVISLVIVIYNIIEIVGNFKEIRATVDMQQKTWDTLGNFPSF 91


>AE014134-3007|AAF53732.1|  109|Drosophila melanogaster CG15168-PA
           protein.
          Length = 109

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
 Frame = +3

Query: 150 FHKVIXXIGFLSVFHTAFSATQHRSYLRITSQEFTRYHW-ILASKLXSVCXLTXGECXMW 326
           F+K++   GF S+ H AFSA  HR+YLR+T QE+      I+   + S+  +      + 
Sbjct: 6   FNKLLLIAGFASLAHAAFSAAHHRTYLRLTEQEWNSLPLDIILQTVISLVIVIYNIIEIV 65

Query: 327 RXIFAKYQLLLNXMLSNGRHRTIFXHFYIFNHRGXALSYXY 449
              F + +  ++           F  FY FNHRG AL+  Y
Sbjct: 66  GN-FKEIRATVDMQQKTWDTLGNFPSFYSFNHRGRALNPGY 105



 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +2

Query: 257 LPLDIGIQAXVSLXADMXXVXNVAGNLREIPAAAEXNAIKWETQNNLPSF 406
           LPLDI +Q  +SL   +  +  + GN +EI A  +     W+T  N PSF
Sbjct: 42  LPLDIILQTVISLVIVIYNIIEIVGNFKEIRATVDMQQKTWDTLGNFPSF 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,748,794
Number of Sequences: 53049
Number of extensions: 256569
Number of successful extensions: 335
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 335
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)