Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1534
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66519-5|CAA91382.2|  500|Caenorhabditis elegans Hypothetical pr...    41   4e-04
AL031627-11|CAA20962.2|  355|Caenorhabditis elegans Hypothetical...    27   10.0 

>Z66519-5|CAA91382.2|  500|Caenorhabditis elegans Hypothetical
           protein B0334.5 protein.
          Length = 500

 Score = 41.1 bits (92), Expect = 4e-04
 Identities = 16/36 (44%), Positives = 25/36 (69%)
 Frame = +3

Query: 144 ASFHKVIXXIGFLSVFHTAFSATQHRSYLRITSQEF 251
           ++ +++I  +  LS+ H A+SA QHR YLR+T Q F
Sbjct: 3   STIYRLITIVSLLSLLHCAYSAAQHRFYLRLTEQPF 38


>AL031627-11|CAA20962.2|  355|Caenorhabditis elegans Hypothetical
           protein Y102A5C.21 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 161 YXXHWFSFGIPYSFLSYTTSIISEDHVTRVYPLPLDI 271
           Y  ++ +  + YSFL+   SI    HV ++  LPL I
Sbjct: 9   YATNYSNCNLTYSFLASWQSISYTSHVIQLVALPLQI 45


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,705,912
Number of Sequences: 27780
Number of extensions: 137616
Number of successful extensions: 234
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)