Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1530
(598 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0348 - 2607315-2607424,2608634-2609030 55 4e-08
06_01_0428 + 3055163-3055573 55 4e-08
06_01_0427 - 3054204-3054614 55 4e-08
06_01_0425 - 3045557-3046004,3046852-3046856 55 4e-08
06_01_0423 - 3039527-3039937 55 4e-08
05_04_0449 - 21355439-21355849 55 4e-08
04_03_0909 + 20748653-20749063 55 4e-08
01_06_1456 + 37507156-37507566 55 4e-08
06_01_0217 - 1644696-1645034,1645143-1645214 52 3e-07
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 52 3e-07
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 52 3e-07
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596 52 3e-07
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 52 3e-07
12_02_0048 - 12852335-12852745 50 2e-06
12_02_0047 - 12836779-12837189 50 2e-06
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228... 40 0.002
08_01_0655 + 5646567-5646650,5646675-5647697,5648227-5648382,564... 29 2.1
07_01_0707 - 5335643-5336905 29 2.8
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -3
Query: 596 RFQSAAIGALQEQARAYLVGLFEDTNLCAI 507
RFQS+A+ ALQE A AYLVGLFEDTNLCAI
Sbjct: 84 RFQSSAVAALQEAAEAYLVGLFEDTNLCAI 113
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/38 (63%), Positives = 25/38 (65%)
Frame = -2
Query: 561 ASEGLSRWLVRRHQLVCYHAKRVTIMPKDIQLARRIRG 448
A+E L L HAKRVTIMPKDIQLARRIRG
Sbjct: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133
>06_01_0428 + 3055163-3055573
Length = 136
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -3
Query: 596 RFQSAAIGALQEQARAYLVGLFEDTNLCAI 507
RFQS+A+ ALQE A AYLVGLFEDTNLCAI
Sbjct: 84 RFQSSAVAALQEAAEAYLVGLFEDTNLCAI 113
Score = 51.2 bits (117), Expect = 6e-07
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -2
Query: 561 ASEGLSRWLVRRHQLVCYHAKRVTIMPKDIQLARRIRGERA 439
A+E L L HAKRVTIMPKDIQLARRIRGERA
Sbjct: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>06_01_0427 - 3054204-3054614
Length = 136
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -3
Query: 596 RFQSAAIGALQEQARAYLVGLFEDTNLCAI 507
RFQS+A+ ALQE A AYLVGLFEDTNLCAI
Sbjct: 84 RFQSSAVAALQEAAEAYLVGLFEDTNLCAI 113
Score = 51.2 bits (117), Expect = 6e-07
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -2
Query: 561 ASEGLSRWLVRRHQLVCYHAKRVTIMPKDIQLARRIRGERA 439
A+E L L HAKRVTIMPKDIQLARRIRGERA
Sbjct: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -3
Query: 596 RFQSAAIGALQEQARAYLVGLFEDTNLCAI 507
RFQS+A+ ALQE A AYLVGLFEDTNLCAI
Sbjct: 98 RFQSSAVAALQEAAEAYLVGLFEDTNLCAI 127
Score = 51.2 bits (117), Expect = 6e-07
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -2
Query: 561 ASEGLSRWLVRRHQLVCYHAKRVTIMPKDIQLARRIRGERA 439
A+E L L HAKRVTIMPKDIQLARRIRGERA
Sbjct: 110 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 150
>06_01_0423 - 3039527-3039937
Length = 136
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -3
Query: 596 RFQSAAIGALQEQARAYLVGLFEDTNLCAI 507
RFQS+A+ ALQE A AYLVGLFEDTNLCAI
Sbjct: 84 RFQSSAVAALQEAAEAYLVGLFEDTNLCAI 113
Score = 51.2 bits (117), Expect = 6e-07
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -2
Query: 561 ASEGLSRWLVRRHQLVCYHAKRVTIMPKDIQLARRIRGERA 439
A+E L L HAKRVTIMPKDIQLARRIRGERA
Sbjct: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>05_04_0449 - 21355439-21355849
Length = 136
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -3
Query: 596 RFQSAAIGALQEQARAYLVGLFEDTNLCAI 507
RFQS+A+ ALQE A AYLVGLFEDTNLCAI
Sbjct: 84 RFQSSAVAALQEAAEAYLVGLFEDTNLCAI 113
Score = 51.2 bits (117), Expect = 6e-07
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -2
Query: 561 ASEGLSRWLVRRHQLVCYHAKRVTIMPKDIQLARRIRGERA 439
A+E L L HAKRVTIMPKDIQLARRIRGERA
Sbjct: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>04_03_0909 + 20748653-20749063
Length = 136
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -3
Query: 596 RFQSAAIGALQEQARAYLVGLFEDTNLCAI 507
RFQS+A+ ALQE A AYLVGLFEDTNLCAI
Sbjct: 84 RFQSSAVAALQEAAEAYLVGLFEDTNLCAI 113
Score = 51.2 bits (117), Expect = 6e-07
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -2
Query: 561 ASEGLSRWLVRRHQLVCYHAKRVTIMPKDIQLARRIRGERA 439
A+E L L HAKRVTIMPKDIQLARRIRGERA
Sbjct: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>01_06_1456 + 37507156-37507566
Length = 136
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -3
Query: 596 RFQSAAIGALQEQARAYLVGLFEDTNLCAI 507
RFQS+A+ ALQE A AYLVGLFEDTNLCAI
Sbjct: 84 RFQSSAVAALQEAAEAYLVGLFEDTNLCAI 113
Score = 51.2 bits (117), Expect = 6e-07
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -2
Query: 561 ASEGLSRWLVRRHQLVCYHAKRVTIMPKDIQLARRIRGERA 439
A+E L L HAKRVTIMPKDIQLARRIRGERA
Sbjct: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = -3
Query: 596 RFQSAAIGALQEQARAYLVGLFEDTNLCAI 507
RFQS A+ ALQE A AYLVGLFEDTNLCAI
Sbjct: 84 RFQSHAVLALQEAAEAYLVGLFEDTNLCAI 113
Score = 51.2 bits (117), Expect = 6e-07
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -2
Query: 561 ASEGLSRWLVRRHQLVCYHAKRVTIMPKDIQLARRIRGERA 439
A+E L L HAKRVTIMPKDIQLARRIRGERA
Sbjct: 96 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = -3
Query: 596 RFQSAAIGALQEQARAYLVGLFEDTNLCAI 507
RFQS A+ ALQE A AYLVGLFEDTNLCAI
Sbjct: 54 RFQSHAVLALQEAAEAYLVGLFEDTNLCAI 83
Score = 51.2 bits (117), Expect = 6e-07
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -2
Query: 561 ASEGLSRWLVRRHQLVCYHAKRVTIMPKDIQLARRIRGERA 439
A+E L L HAKRVTIMPKDIQLARRIRGERA
Sbjct: 66 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 106
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = -3
Query: 596 RFQSAAIGALQEQARAYLVGLFEDTNLCAI 507
RFQS A+ ALQE A AYLVGLFEDTNLCAI
Sbjct: 98 RFQSHAVLALQEAAEAYLVGLFEDTNLCAI 127
Score = 51.2 bits (117), Expect = 6e-07
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -2
Query: 561 ASEGLSRWLVRRHQLVCYHAKRVTIMPKDIQLARRIRGERA 439
A+E L L HAKRVTIMPKDIQLARRIRGERA
Sbjct: 110 AAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 150
>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
Length = 115
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = -3
Query: 596 RFQSAAIGALQEQARAYLVGLFEDTNLCAI 507
RFQS A+ ALQE A AYLVGLFEDTNLCAI
Sbjct: 63 RFQSHAVLALQEAAEAYLVGLFEDTNLCAI 92
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = -2
Query: 561 ASEGLSRWLVRRHQLVCYHAKRVTIMPKDIQLARRIRGER 442
A+E L L H+KRVTIM KD+QLARRIRGER
Sbjct: 75 AAEAYLVGLFEDTNLCAIHSKRVTIMSKDVQLARRIRGER 114
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = -3
Query: 596 RFQSAAIGALQEQARAYLVGLFEDTNLCAI 507
RFQS A+ ALQE A AYLVGLFEDTNLCAI
Sbjct: 159 RFQSHAVLALQEAAEAYLVGLFEDTNLCAI 188
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = -2
Query: 561 ASEGLSRWLVRRHQLVCYHAKRVTIMPKDIQLARRIRGER 442
A+E L L H+KRVTIM KD+QLARRIRGER
Sbjct: 171 AAEAYLVGLFEDTNLCAIHSKRVTIMSKDVQLARRIRGER 210
>12_02_0048 - 12852335-12852745
Length = 136
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -2
Query: 537 LVRRHQLVCYHAKRVTIMPKDIQLARRIRGERA 439
L + L HAKRVTIMPKDIQLARRIRGE+A
Sbjct: 104 LFKDTNLCVIHAKRVTIMPKDIQLARRIRGEKA 136
Score = 49.2 bits (112), Expect = 2e-06
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -3
Query: 596 RFQSAAIGALQEQARAYLVGLFEDTNLCAI 507
RFQS+A+ ALQE A YLVGLF+DTNLC I
Sbjct: 84 RFQSSAVVALQEAAETYLVGLFKDTNLCVI 113
>12_02_0047 - 12836779-12837189
Length = 136
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/30 (73%), Positives = 24/30 (80%)
Frame = -3
Query: 596 RFQSAAIGALQEQARAYLVGLFEDTNLCAI 507
RFQS+A+ LQE A YLVGLFEDTNLC I
Sbjct: 84 RFQSSAMAVLQEAAETYLVGLFEDTNLCVI 113
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = -2
Query: 519 LVCYHAKRVTIMPKDIQLARRIRGERA 439
L HAKRVTIMPKDIQLAR I GE+A
Sbjct: 110 LCVIHAKRVTIMPKDIQLARCIGGEKA 136
>05_05_0297 -
23921648-23921758,23922011-23922089,23922774-23922822,
23923180-23923255,23923693-23923767,23923862-23923992,
23924830-23924935
Length = 208
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -2
Query: 519 LVCYHAKRVTIMPKDIQLARRIRGER 442
L HAKRVTIM KD+QLARRI G R
Sbjct: 119 LCAIHAKRVTIMQKDMQLARRIGGRR 144
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3
Query: 596 RFQSAAIGALQEQARAYLVGLFEDTNLCAI 507
R+ A+ ALQE A +LV +FE +NLCAI
Sbjct: 93 RWTLEALLALQEAAEYHLVDIFEVSNLCAI 122
>08_01_0655 +
5646567-5646650,5646675-5647697,5648227-5648382,
5648499-5648529,5648636-5648808
Length = 488
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 514 VLSRQTCDHHAEGYSTCSTNPW 449
VLS CD E YSTC + W
Sbjct: 89 VLSSPVCDPEVEDYSTCDVDAW 110
>07_01_0707 - 5335643-5336905
Length = 420
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 444 VHHGFVEQVEYPSA*WSHVWRDSTQVGVFEQANEISPRLLLESSDGGRLET 596
+HHG + + + + W + R + +Q N++SP LL + G L T
Sbjct: 267 IHHGAIARFDLDTEQWRPLLRGPLNIHQIQQDNDLSPPLLTLTELKGFLVT 317
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,670,140
Number of Sequences: 37544
Number of extensions: 230435
Number of successful extensions: 582
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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