Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1530
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.      58   2e-10
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        53   8e-09
EF426165-1|ABO26408.1|  155|Anopheles gambiae unknown protein.         23   7.5  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   7.5  

>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score = 58.0 bits (134), Expect = 2e-10
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -3

Query: 596 RFQSAAIGALQEQARAYLVGLFEDTNLCAI 507
           RFQSAAIGALQE + AYLVGLFEDTNLCAI
Sbjct: 84  RFQSAAIGALQEASEAYLVGLFEDTNLCAI 113



 Score = 52.4 bits (120), Expect = 1e-08
 Identities = 28/41 (68%), Positives = 28/41 (68%)
 Frame = -2

Query: 561 ASEGLSRWLVRRHQLVCYHAKRVTIMPKDIQLARRIRGERA 439
           ASE     L     L   HAKRVTIMPKDIQLARRIRGERA
Sbjct: 96  ASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 52.8 bits (121), Expect = 8e-09
 Identities = 24/30 (80%), Positives = 27/30 (90%)
 Frame = -3

Query: 596 RFQSAAIGALQEQARAYLVGLFEDTNLCAI 507
           RFQS+A+ ALQE + AYLVGLFEDTNLCAI
Sbjct: 82  RFQSSAVMALQEASEAYLVGLFEDTNLCAI 111


>EF426165-1|ABO26408.1|  155|Anopheles gambiae unknown protein.
          Length = 155

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 551 AYLVG-LFEDTNLCAITPNV*PSCRRI 474
           AY+ G LF D ++C++  N  PS  RI
Sbjct: 93  AYVRGCLFNDKSMCSLIQNALPSEIRI 119


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
 Frame = +3

Query: 33  IYLTPNTQLHIMNQFKHRLLTR----MCGLEILPNN 128
           IY+ P T  H + + KH L  R    +   +I+PNN
Sbjct: 286 IYVIPITTRHFIYEIKHPLRLRGDILVRCYQIIPNN 321


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,105
Number of Sequences: 2352
Number of extensions: 9533
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)