Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1528
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74028-2|CAA98428.1| 1058|Caenorhabditis elegans Hypothetical pr...    28   4.3  
Z75549-2|CAA99916.1|  313|Caenorhabditis elegans Hypothetical pr...    27   5.7  
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p...    27   10.0 
Z50797-9|CAL36516.1|  640|Caenorhabditis elegans Hypothetical pr...    27   10.0 
U00033-9|AAC48293.1|  323|Caenorhabditis elegans Hypothetical pr...    27   10.0 

>Z74028-2|CAA98428.1| 1058|Caenorhabditis elegans Hypothetical
           protein C14C10.4 protein.
          Length = 1058

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +1

Query: 115 DVVEARGELYRNVAEREENEQGR 183
           +VV  R    R +AERE+NEQGR
Sbjct: 263 NVVRLRCAAARAIAEREKNEQGR 285


>Z75549-2|CAA99916.1|  313|Caenorhabditis elegans Hypothetical
           protein T19C4.2 protein.
          Length = 313

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = -1

Query: 412 INLIEFNNTSQIFYSS 365
           INL+ F NTSQ+FYS+
Sbjct: 133 INLLPFINTSQLFYST 148


>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical
           protein T22H6.6a protein.
          Length = 1405

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +1

Query: 109 VRDVVEARGELYRNVAEREENEQGRNEP 192
           V+DV++ + E++++  ER  ++   NEP
Sbjct: 814 VKDVMDVKPEVFQSAKERRRSKVSANEP 841


>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
           protein T22H6.6a protein.
          Length = 1405

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +1

Query: 109 VRDVVEARGELYRNVAEREENEQGRNEP 192
           V+DV++ + E++++  ER  ++   NEP
Sbjct: 814 VKDVMDVKPEVFQSAKERRRSKVSANEP 841


>Z50797-9|CAL36516.1|  640|Caenorhabditis elegans Hypothetical
           protein T22H6.6b protein.
          Length = 640

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +1

Query: 109 VRDVVEARGELYRNVAEREENEQGRNEP 192
           V+DV++ + E++++  ER  ++   NEP
Sbjct: 49  VKDVMDVKPEVFQSAKERRRSKVSANEP 76


>U00033-9|AAC48293.1|  323|Caenorhabditis elegans Hypothetical
           protein F37C12.1 protein.
          Length = 323

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 121 VEARGELYRNVAEREENEQGRNEPEDSITHPSA 219
           + + G + R + + E+N  G +E +  I  PSA
Sbjct: 204 ITSEGRIERRIKDDEDNSDGADEDDKDIPGPSA 236


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,987,954
Number of Sequences: 27780
Number of extensions: 194865
Number of successful extensions: 668
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)