Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1523
         (368 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      54   4e-10
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          46   1e-07
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      32   0.002
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   2.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   2.0  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   6.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   8.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    20   8.1  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 54.4 bits (125), Expect = 4e-10
 Identities = 21/44 (47%), Positives = 32/44 (72%)
 Frame = +3

Query: 234 CRRQVIAAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSAL 365
           C  + + AH++VLS CSPYF+E+ K  P +HP++ L+DV+ S L
Sbjct: 38  CDGRSLKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDVAFSDL 81



 Score = 36.7 bits (81), Expect = 9e-05
 Identities = 20/62 (32%), Positives = 28/62 (45%)
 Frame = +1

Query: 124 MASDEQF*LCWNNLHARIVPGYHGLLPRGDLLDVTLAAEGRLLQHIN*FYQYVLPIFKKC 303
           M   + F L WNN  + I   +  L    D +DVTLA +GR L+          P F++ 
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFREL 60

Query: 304 SK 309
            K
Sbjct: 61  LK 62


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 46.4 bits (105), Expect = 1e-07
 Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = +3

Query: 234 CRRQVIAAHKLVLSVCSPYFQEMFKMNPTQHP-IVFLKDVSHSALK 368
           C    + AHK+VLS CS YFQ++   NP +HP I+  +DV  + LK
Sbjct: 42  CNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLK 87



 Score = 27.9 bits (59), Expect = 0.040
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 136 EQF*LCWNNLHARIVPGYHGLLPRGDLLDVTLAA-EGRLLQH 258
           + + L WNN  + +   +H LL     +DVTLA  E  L  H
Sbjct: 9   QHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAH 50


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 31.9 bits (69), Expect = 0.002
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 124 MASDEQF*LCWNNLHARIVPGYHGLLPRGDLLDVTLAAE 240
           M   + F L WNN  + I   +  L    D +DVTLA E
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 190 HGLLPRGDLLDV 225
           HG+LPRG+L  +
Sbjct: 88  HGMLPRGELFSL 99


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 190 HGLLPRGDLLDV 225
           HG+LPRG+L  +
Sbjct: 88  HGMLPRGELFSL 99


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 154 WNNLHARIVPGYHGLLPRGDLLDVTLAAEGRLLQ 255
           W  +    VP Y G+    +++   +   GRLLQ
Sbjct: 76  WRGMTFVTVPRYKGVPSSLNVISEKIGNGGRLLQ 109


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 178 VPGYHGLLPRGDLLDVTLAAE 240
           VPG   +LP G+L+     AE
Sbjct: 48  VPGLRQVLPNGNLVFPPFRAE 68


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 167 CKLFQHSQNCSSDAMIASTRRGS 99
           CK+   S     + +IAS R+ S
Sbjct: 470 CKMILESMEIERNGLIASQRQNS 492


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,193
Number of Sequences: 438
Number of extensions: 1864
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)