BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1509
(499 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 22 4.1
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 22 4.1
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 22 4.1
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 22 4.1
DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein. 21 5.4
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 7.1
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 9.4
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 9.4
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 238 PPPPQTRRRGEXCCPRARSSPVHSP 164
PP P+ RR E + PV+ P
Sbjct: 54 PPHPRLRREAEPEAEPGNNRPVYIP 78
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 238 PPPPQTRRRGEXCCPRARSSPVHSP 164
PP P+ RR E + PV+ P
Sbjct: 110 PPHPRLRREAEPEAEPGNNRPVYIP 134
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 238 PPPPQTRRRGEXCCPRARSSPVHSP 164
PP P+ RR E + PV+ P
Sbjct: 166 PPHPRLRREAEPEAEPGNNRPVYIP 190
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 238 PPPPQTRRRGEXCCPRARSSPVHSP 164
PP P+ RR E + PV+ P
Sbjct: 194 PPHPRLRREAEPEAEPGNNRPVYIP 218
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 238 PPPPQTRRRGEXCCPRARSSPVHSP 164
PP P+ RR E + PV+ P
Sbjct: 222 PPHPRLRREAEPEAEPGNNRPVYIP 246
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 238 PPPPQTRRRGEXCCPRARSSPVHSP 164
PP P+ RR E + PV+ P
Sbjct: 55 PPHPRLRREAEPEAEPGNNRPVYIP 79
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 238 PPPPQTRRRGEXCCPRARSSPVHSP 164
PP P+ RR E + PV+ P
Sbjct: 83 PPHPRLRREAEPEAEPGNNRPVYIP 107
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 238 PPPPQTRRRGEXCCPRARSSPVHSP 164
PP P+ RR E + PV+ P
Sbjct: 111 PPHPRLRREAEPEAEPGNNRPVYIP 135
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 21.8 bits (44), Expect = 4.1
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = -1
Query: 238 PPPPQTRRRGEXCCPRARSSPVHSP 164
PP P+ RR E + P++ P
Sbjct: 55 PPHPRLRREAEPKAEPGNNRPIYIP 79
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 238 PPPPQTRRRGEXCCPRARSSPVHSP 164
PP P+ RR E + PV+ P
Sbjct: 83 PPHPRLRREAESEAEPGNNRPVYIP 107
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 238 PPPPQTRRRGEXCCPRARSSPVHSP 164
PP P+ RR E + PV+ P
Sbjct: 26 PPHPRLRREAEPEAEPGNNRPVYIP 50
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 238 PPPPQTRRRGEXCCPRARSSPVHSP 164
PP P+ RR E + PV+ P
Sbjct: 54 PPHPRLRREAEPEAEPGNNRPVYIP 78
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 238 PPPPQTRRRGEXCCPRARSSPVHSP 164
PP P+ RR E + PV+ P
Sbjct: 82 PPHPRLRREAEPEAEPGNNRPVYIP 106
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 238 PPPPQTRRRGEXCCPRARSSPVHSP 164
PP P+ RR E + PV+ P
Sbjct: 110 PPHPRLRREAEPEAEPGNNRPVYIP 134
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -1
Query: 238 PPPPQTRRRGEXCCPRARSSPVHSP 164
PP P+ RR E + PV+ P
Sbjct: 166 PPHPRLRREAEPEAEPGNNRPVYIP 190
>DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein.
Length = 135
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 388 EPNFLFXLIKXLTIYFKY 335
+PN L + K L +FKY
Sbjct: 109 DPNALIKISKILECFFKY 126
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.0 bits (42), Expect = 7.1
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 128 PEENCTETLLRERRMNR 178
PEEN E LL +NR
Sbjct: 40 PEENVVEELLSPLTLNR 56
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 20.6 bits (41), Expect = 9.4
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +2
Query: 386 LVLLNSMRXIYNHVYNXXLXCVPF*XCTSL 475
LV L S N+VY L CTS+
Sbjct: 298 LVALGSYNKFNNNVYKDALIVCTVNSCTSM 327
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 20.6 bits (41), Expect = 9.4
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +2
Query: 386 LVLLNSMRXIYNHVYNXXLXCVPF*XCTSL 475
LV L S N+VY L CTS+
Sbjct: 351 LVALGSYNKFNNNVYKDALIVCTVNSCTSM 380
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,858
Number of Sequences: 438
Number of extensions: 1774
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -