Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1508
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089319-1|AAL90057.1|  411|Drosophila melanogaster AT12568p pro...    44   2e-04
AY051459-1|AAK92883.1|  659|Drosophila melanogaster GH13213p pro...    44   2e-04
AE014296-1157|AAF50643.1|  659|Drosophila melanogaster CG32392-P...    44   2e-04
AE014296-1156|AAF50642.2|  411|Drosophila melanogaster CG32392-P...    44   2e-04
AY071301-1|AAL48923.1|  783|Drosophila melanogaster RE32990p pro...    28   7.2  
AF197059-1|AAF62399.1|  783|Drosophila melanogaster retinoblasto...    28   7.2  
AF195899-1|AAF66827.1|  782|Drosophila melanogaster RB-related p...    28   7.2  
AE014297-2127|AAF55258.1|  783|Drosophila melanogaster CG5083-PA...    28   7.2  

>AY089319-1|AAL90057.1|  411|Drosophila melanogaster AT12568p
           protein.
          Length = 411

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = +1

Query: 37  PWLVKEVSLEIESIITSRDVITEIXRDVVEARGELYRNVAEREENEQG 180
           PWL  EV+ E+  I+ SR+++T I +++++ R E+Y    E E    G
Sbjct: 324 PWLSAEVAEEVGHIVDSREILTAIIQEIIKQRAEIYAGYKEPESEPSG 371


>AY051459-1|AAK92883.1|  659|Drosophila melanogaster GH13213p
           protein.
          Length = 659

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = +1

Query: 37  PWLVKEVSLEIESIITSRDVITEIXRDVVEARGELYRNVAEREENEQG 180
           PWL  EV+ E+  I+ SR+++T I +++++ R E+Y    E E    G
Sbjct: 572 PWLSAEVAEEVGHIVDSREILTAIIQEIIKQRAEIYAGYKEPESEPSG 619


>AE014296-1157|AAF50643.1|  659|Drosophila melanogaster CG32392-PB,
           isoform B protein.
          Length = 659

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = +1

Query: 37  PWLVKEVSLEIESIITSRDVITEIXRDVVEARGELYRNVAEREENEQG 180
           PWL  EV+ E+  I+ SR+++T I +++++ R E+Y    E E    G
Sbjct: 572 PWLSAEVAEEVGHIVDSREILTAIIQEIIKQRAEIYAGYKEPESEPSG 619


>AE014296-1156|AAF50642.2|  411|Drosophila melanogaster CG32392-PA,
           isoform A protein.
          Length = 411

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = +1

Query: 37  PWLVKEVSLEIESIITSRDVITEIXRDVVEARGELYRNVAEREENEQG 180
           PWL  EV+ E+  I+ SR+++T I +++++ R E+Y    E E    G
Sbjct: 324 PWLSAEVAEEVGHIVDSREILTAIIQEIIKQRAEIYAGYKEPESEPSG 371


>AY071301-1|AAL48923.1|  783|Drosophila melanogaster RE32990p
           protein.
          Length = 783

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 238 PPPPQTRRRGE*CCPRARSSPVHSPLSQQ 152
           PPPP+  + G  C     SSP  SPLS Q
Sbjct: 724 PPPPRVCQSGS-CSSHPPSSPAASPLSLQ 751


>AF197059-1|AAF62399.1|  783|Drosophila melanogaster retinoblastoma
           protein homologRBF2 protein.
          Length = 783

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 238 PPPPQTRRRGE*CCPRARSSPVHSPLSQQ 152
           PPPP+  + G  C     SSP  SPLS Q
Sbjct: 724 PPPPRVCQSGS-CSSHPPSSPAASPLSLQ 751


>AF195899-1|AAF66827.1|  782|Drosophila melanogaster RB-related
           protein RBF2 protein.
          Length = 782

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 238 PPPPQTRRRGE*CCPRARSSPVHSPLSQQ 152
           PPPP+  + G  C     SSP  SPLS Q
Sbjct: 724 PPPPRVCQSGS-CSSHPPSSPAASPLSLQ 751


>AE014297-2127|AAF55258.1|  783|Drosophila melanogaster CG5083-PA
           protein.
          Length = 783

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = -2

Query: 238 PPPPQTRRRGE*CCPRARSSPVHSPLSQQ 152
           PPPP+  + G  C     SSP  SPLS Q
Sbjct: 724 PPPPRVCQSGS-CSSHPPSSPAASPLSLQ 751


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,977,862
Number of Sequences: 53049
Number of extensions: 299443
Number of successful extensions: 854
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)