Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1498
(348 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U73379-1|AAB53362.1| 179|Homo sapiens cyclin-selective ubiquiti... 28 9.3
CR456988-1|CAG33269.1| 179|Homo sapiens UBE2C protein. 28 9.3
BT020166-1|AAV38968.1| 179|Homo sapiens ubiquitin-conjugating e... 28 9.3
BT020165-1|AAV38967.1| 179|Homo sapiens ubiquitin-conjugating e... 28 9.3
BT007300-1|AAP35964.1| 179|Homo sapiens ubiquitin-conjugating e... 28 9.3
BC050736-1|AAH50736.1| 179|Homo sapiens ubiquitin-conjugating e... 28 9.3
BC041893-1|AAH41893.1| 115|Homo sapiens TTC17 protein protein. 28 9.3
BC017238-1|AAH17238.1| 1141|Homo sapiens tetratricopeptide repea... 28 9.3
BC016292-1|AAH16292.1| 179|Homo sapiens ubiquitin-conjugating e... 28 9.3
BC007656-1|AAH07656.1| 179|Homo sapiens ubiquitin-conjugating e... 28 9.3
AL050348-16|CAC36108.1| 140|Homo sapiens ubiquitin-conjugating ... 28 9.3
AL050348-15|CAB66118.1| 179|Homo sapiens ubiquitin-conjugating ... 28 9.3
AL050348-14|CAO03378.1| 150|Homo sapiens ubiquitin-conjugating ... 28 9.3
AK023161-1|BAB14438.1| 379|Homo sapiens protein ( Homo sapiens ... 28 9.3
>U73379-1|AAB53362.1| 179|Homo sapiens cyclin-selective ubiquitin
carrier protein protein.
Length = 179
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 267 YIAAIYMPSGVVYHSPTLKLAEPC 196
Y ++ PSG Y++PT+K PC
Sbjct: 79 YKLSLEFPSGYPYNAPTVKFLTPC 102
>CR456988-1|CAG33269.1| 179|Homo sapiens UBE2C protein.
Length = 179
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 267 YIAAIYMPSGVVYHSPTLKLAEPC 196
Y ++ PSG Y++PT+K PC
Sbjct: 79 YKLSLEFPSGYPYNAPTVKFLTPC 102
>BT020166-1|AAV38968.1| 179|Homo sapiens ubiquitin-conjugating
enzyme E2C protein.
Length = 179
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 267 YIAAIYMPSGVVYHSPTLKLAEPC 196
Y ++ PSG Y++PT+K PC
Sbjct: 79 YKLSLEFPSGYPYNAPTVKFLTPC 102
>BT020165-1|AAV38967.1| 179|Homo sapiens ubiquitin-conjugating
enzyme E2C protein.
Length = 179
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 267 YIAAIYMPSGVVYHSPTLKLAEPC 196
Y ++ PSG Y++PT+K PC
Sbjct: 79 YKLSLEFPSGYPYNAPTVKFLTPC 102
>BT007300-1|AAP35964.1| 179|Homo sapiens ubiquitin-conjugating
enzyme E2C protein.
Length = 179
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 267 YIAAIYMPSGVVYHSPTLKLAEPC 196
Y ++ PSG Y++PT+K PC
Sbjct: 79 YKLSLEFPSGYPYNAPTVKFLTPC 102
>BC050736-1|AAH50736.1| 179|Homo sapiens ubiquitin-conjugating
enzyme E2C protein.
Length = 179
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 267 YIAAIYMPSGVVYHSPTLKLAEPC 196
Y ++ PSG Y++PT+K PC
Sbjct: 79 YKLSLEFPSGYPYNAPTVKFLTPC 102
>BC041893-1|AAH41893.1| 115|Homo sapiens TTC17 protein protein.
Length = 115
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -1
Query: 306 HACVNGYTRLSAGYIAAIYMPSGVVYHSPTLKLAEPCPRSKSRLVTLMSRYLIHK 142
H VN +T L Y+A +V++ TLKL +K+R+ T+ ++ K
Sbjct: 57 HFAVNHFT-LGNVYVAMEEFEKALVWYESTLKLQPEFVPAKNRIQTIQCHLMLKK 110
>BC017238-1|AAH17238.1| 1141|Homo sapiens tetratricopeptide repeat
domain 17 protein.
Length = 1141
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -1
Query: 306 HACVNGYTRLSAGYIAAIYMPSGVVYHSPTLKLAEPCPRSKSRLVTLMSRYLIHK 142
H VN +T L Y+A +V++ TLKL +K+R+ T+ ++ K
Sbjct: 1083 HFAVNHFT-LGNVYVAMEEFEKALVWYESTLKLQPEFVPAKNRIQTIQCHLMLKK 1136
>BC016292-1|AAH16292.1| 179|Homo sapiens ubiquitin-conjugating
enzyme E2C protein.
Length = 179
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 267 YIAAIYMPSGVVYHSPTLKLAEPC 196
Y ++ PSG Y++PT+K PC
Sbjct: 79 YKLSLEFPSGYPYNAPTVKFLTPC 102
>BC007656-1|AAH07656.1| 179|Homo sapiens ubiquitin-conjugating
enzyme E2C protein.
Length = 179
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 267 YIAAIYMPSGVVYHSPTLKLAEPC 196
Y ++ PSG Y++PT+K PC
Sbjct: 79 YKLSLEFPSGYPYNAPTVKFLTPC 102
>AL050348-16|CAC36108.1| 140|Homo sapiens ubiquitin-conjugating
enzyme E2C protein.
Length = 140
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 267 YIAAIYMPSGVVYHSPTLKLAEPC 196
Y ++ PSG Y++PT+K PC
Sbjct: 40 YKLSLEFPSGYPYNAPTVKFLTPC 63
>AL050348-15|CAB66118.1| 179|Homo sapiens ubiquitin-conjugating
enzyme E2C protein.
Length = 179
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 267 YIAAIYMPSGVVYHSPTLKLAEPC 196
Y ++ PSG Y++PT+K PC
Sbjct: 79 YKLSLEFPSGYPYNAPTVKFLTPC 102
>AL050348-14|CAO03378.1| 150|Homo sapiens ubiquitin-conjugating
enzyme E2C protein.
Length = 150
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 267 YIAAIYMPSGVVYHSPTLKLAEPC 196
Y ++ PSG Y++PT+K PC
Sbjct: 50 YKLSLEFPSGYPYNAPTVKFLTPC 73
>AK023161-1|BAB14438.1| 379|Homo sapiens protein ( Homo sapiens
cDNA FLJ13099 fis, clone NT2RP3002248. ).
Length = 379
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -1
Query: 306 HACVNGYTRLSAGYIAAIYMPSGVVYHSPTLKLAEPCPRSKSRLVTLMSRYLIHK 142
H VN +T L Y+A +V++ TLKL +K+R+ T+ ++ K
Sbjct: 321 HFAVNHFT-LGNVYVAMEEFEKALVWYESTLKLQPEFVPAKNRIQTIQCHLMLKK 374
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,540,536
Number of Sequences: 237096
Number of extensions: 915486
Number of successful extensions: 1637
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1637
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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