Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1497
         (287 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75549-2|CAA99916.1|  313|Caenorhabditis elegans Hypothetical pr...    28   1.2  
Z81040-2|CAB02782.2|  466|Caenorhabditis elegans Hypothetical pr...    27   1.6  
AC006617-2|AAF39765.2|  442|Caenorhabditis elegans Hypothetical ...    25   6.6  
U97017-7|AAB52357.1|  130|Caenorhabditis elegans Hypothetical pr...    25   8.7  
U97017-6|AAB52362.1|  374|Caenorhabditis elegans Hypothetical pr...    25   8.7  

>Z75549-2|CAA99916.1|  313|Caenorhabditis elegans Hypothetical
           protein T19C4.2 protein.
          Length = 313

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 15/60 (25%), Positives = 32/60 (53%)
 Frame = -1

Query: 215 FYLTKRLKIFKFQVFRXVQHEDVIIESGYCYFHRDFLDNPISISV*RFHSLILTSLISKT 36
           FYL   + ++   V+  ++H      S + ++  DFL N ++  +  F++L L+S+  +T
Sbjct: 9   FYLIPSMILYLITVYVIIKHWKKFKSSFFVWYLLDFLMNTLTTGI-TFYTLKLSSVTCQT 67


>Z81040-2|CAB02782.2|  466|Caenorhabditis elegans Hypothetical
           protein C26E1.2 protein.
          Length = 466

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +1

Query: 4   ITAEFVQFLENVLEIKEVKIKEWNLYTEIL 93
           I++ F+ F+E + E+K VKI    + T I+
Sbjct: 58  ISSSFISFIEAISEVKTVKITPAEIITRIV 87


>AC006617-2|AAF39765.2|  442|Caenorhabditis elegans Hypothetical
           protein C39B5.5 protein.
          Length = 442

 Score = 25.4 bits (53), Expect = 6.6
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -1

Query: 74  FHSLILTSLISKTFSKNCT 18
           F S I T  ISKTFS NC+
Sbjct: 202 FKSRIPTMSISKTFSTNCS 220


>U97017-7|AAB52357.1|  130|Caenorhabditis elegans Hypothetical
           protein F47B3.2 protein.
          Length = 130

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = -1

Query: 170 RXVQHEDVIIESGYCYFHRDFLDNPISISV*RFHSLILTSLISKTFSK 27
           R  +H  +  E+ Y Y HR  L+  + +    +  L+LT    + ++K
Sbjct: 58  RNQRHYAIQTEAQYMYIHRVLLEYFLELHKETYEGLLLTKNYEEKYAK 105


>U97017-6|AAB52362.1|  374|Caenorhabditis elegans Hypothetical
           protein F47B3.7 protein.
          Length = 374

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = -1

Query: 170 RXVQHEDVIIESGYCYFHRDFLDNPISISV*RFHSLILTSLISKTFSK 27
           R  +H  +  E+ Y Y HR  L+  + +    +  L+LT    + ++K
Sbjct: 302 RNQRHYAIQTEAQYMYIHRVLLEYFLELHKETYEGLLLTKNYEEKYAK 349


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,778,661
Number of Sequences: 27780
Number of extensions: 91708
Number of successful extensions: 241
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 269889950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)