Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1497
         (287 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   2.3  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    20   7.0  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    20   7.0  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    20   7.0  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           19   9.2  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = +2

Query: 104  PKNHDESNSN 133
            P+NHD++NS+
Sbjct: 1864 PRNHDQNNSS 1873


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 101 YPKNHDESNSNH 136
           YP NH  S S H
Sbjct: 97  YPPNHPLSGSKH 108


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 9/39 (23%), Positives = 21/39 (53%)
 Frame = +1

Query: 1   LITAEFVQFLENVLEIKEVKIKEWNLYTEILIGLSKKSR 117
           +I    +   +NV+ +K+VKI     Y  I+  +++ ++
Sbjct: 1   MIFTNNIAAFQNVVLVKKVKIVLLIFYGSIMFSMTQVNK 39


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.8 bits (39), Expect = 7.0
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 101 YPKNHDESNSNH 136
           YP NH  S S H
Sbjct: 97  YPPNHPLSGSKH 108


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 46  IKEVKIKEWNLYTEILIGL 102
           I + ++KE +LYT I++ +
Sbjct: 297 IPKEQVKEDSLYTNIVVDI 315


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,296
Number of Sequences: 438
Number of extensions: 1065
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5744526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)