Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1496
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     25   3.0  
AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase p...    24   4.0  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   9.2  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   9.2  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +1

Query: 118 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHF 252
           M++ V TL      L+V     +EN KA  + + G P     L F
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 45



 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +1

Query: 118 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHF 252
           M++ V TL      L+V     +EN KA  + + G P     L F
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 121



 Score = 24.6 bits (51), Expect = 3.0
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +1

Query: 118 MKVTVTTLNDDIFVLDVSEDLELENFKAFCEIESGFPAKDITLHF 252
           M++ V TL      L+V     +EN KA  + + G P     L F
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIF 197


>AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 552 DLPDALLTGSLDPFAAGLREQIFG*N 629
           D+PD+ LT    PF A L+ + FG N
Sbjct: 31  DVPDSYLTDHYRPFGAALQNR-FGTN 55


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 388 LGKAWLESLTLRFCAEFTMCRRIITSPSWTP 296
           L ++W+ SL +R       CR   T+PSW P
Sbjct: 108 LEQSWIYSLCMR-------CRVEYTTPSWEP 131


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 15/61 (24%), Positives = 29/61 (47%)
 Frame = +2

Query: 410 QQHPKSYNISKSSMASRNTPVEEDPRIIREMFLLTQINWHYLNRNNXRLARCSTNWXFRS 589
           Q + K Y + K+++++++  V++      +     QI  H   +N      C T W +RS
Sbjct: 164 QSYSKLYLLLKATLSAQSFRVQKKQTKQNKKI---QIK-HTKTKNGCCRKTCGTGWKYRS 219

Query: 590 I 592
           I
Sbjct: 220 I 220


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,636
Number of Sequences: 2352
Number of extensions: 12675
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)