Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1496
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1 p... 31 1.0
AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical ... 31 1.0
AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily a... 30 1.4
U21317-4|AAA62523.1| 719|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81072-3|CAB03022.1| 486|Caenorhabditis elegans Hypothetical pr... 27 9.8
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 27 9.8
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 27 9.8
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 27 9.8
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 27 9.8
U27559-1|AAC47125.1| 171|Caenorhabditis elegans cyclophilin pro... 27 9.8
AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical ... 27 9.8
>U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1
protein.
Length = 192
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 187 ENFKAFCEIESGFPAKDITLHFKANHF 267
ENF+A C E G + + LHFK + F
Sbjct: 52 ENFRALCTGEKGVGEQGVALHFKGSKF 78
>AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical
protein Y49A3A.5 protein.
Length = 192
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 187 ENFKAFCEIESGFPAKDITLHFKANHF 267
ENF+A C E G + + LHFK + F
Sbjct: 52 ENFRALCTGEKGVGEQGVALHFKGSKF 78
>AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform a protein.
Length = 851
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 401 P*LQQHPKSYNISKSSMASRNTPVEEDPRIIREMFLLTQINWHYLNRNNXRLARCSTNWX 580
P + + P S + S S++ N + R F + ++N N+ + + STN
Sbjct: 709 PPMSRVPASSSTSVSAIGKNNAAASSNSYRYR-CFFVRKLNLKISNKKKWKSKKNSTNLV 767
Query: 581 FRSI-CCWTT*TNIWLELKGSNQ 646
FRS C +T TNI ++ GS +
Sbjct: 768 FRSSKTCTSTSTNI-IKTSGSTE 789
>U21317-4|AAA62523.1| 719|Caenorhabditis elegans Hypothetical
protein B0495.2 protein.
Length = 719
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 360 VNDSSQALPSGIASLDFSNIQSPTTSANHQWLRE 461
+ND+ L +G+ +LD N S T + +H+W E
Sbjct: 616 LNDTGFKLLNGLLTLDPKNRFSATQALDHEWFTE 649
>Z81072-3|CAB03022.1| 486|Caenorhabditis elegans Hypothetical
protein F30A10.4 protein.
Length = 486
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 470 VEEDPRIIREMFLLTQINWHYLNRNNXRLARCSTNWXFRSIC 595
+E + + +E L Q +WH L +++ C + W SIC
Sbjct: 371 MESNCTVAKEDILTRQTHWH-LEQSDGLYQDCKSKWLRHSIC 411
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +2
Query: 440 KSSMASRNTPVEEDPRIIREMFLLTQINWHYLNRNNXRLARC 565
KS+M + P EE R ++E + N NRN C
Sbjct: 1542 KSAMTTAKKPAEEQERAVQEQRRWEESNHEMTNRNTALTKEC 1583
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +2
Query: 440 KSSMASRNTPVEEDPRIIREMFLLTQINWHYLNRNNXRLARC 565
KS+M + P EE R ++E + N NRN C
Sbjct: 1542 KSAMTTAKKPAEEQERAVQEQRRWEESNHEMTNRNTALTKEC 1583
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +2
Query: 440 KSSMASRNTPVEEDPRIIREMFLLTQINWHYLNRNNXRLARC 565
KS+M + P EE R ++E + N NRN C
Sbjct: 1302 KSAMTTAKKPAEEQERAVQEQRRWEESNHEMTNRNTALTKEC 1343
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +2
Query: 440 KSSMASRNTPVEEDPRIIREMFLLTQINWHYLNRNNXRLARC 565
KS+M + P EE R ++E + N NRN C
Sbjct: 1542 KSAMTTAKKPAEEQERAVQEQRRWEESNHEMTNRNTALTKEC 1583
>U27559-1|AAC47125.1| 171|Caenorhabditis elegans cyclophilin
protein.
Length = 171
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 187 ENFKAFCEIESGFPAKDITLHFKANHF 267
ENF+A C E G LHFK + F
Sbjct: 34 ENFRALCTGEKGVGKSGKPLHFKGSKF 60
>AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical
protein Y75B12B.2 protein.
Length = 171
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 187 ENFKAFCEIESGFPAKDITLHFKANHF 267
ENF+A C E G LHFK + F
Sbjct: 34 ENFRALCTGEKGVGKSGKPLHFKGSKF 60
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,124,604
Number of Sequences: 27780
Number of extensions: 295581
Number of successful extensions: 749
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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