Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1494
(598 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 116 1e-26
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 106 1e-23
11_01_0617 - 4939108-4939259,4939584-4940259 31 0.53
07_01_1005 + 8509777-8509968,8510059-8510205,8510326-8510544,851... 29 2.1
01_07_0036 + 40647046-40647100,40647120-40647571,40648135-406482... 29 2.1
04_04_0028 - 22243272-22243577,22244564-22244713,22244919-222456... 29 2.8
03_01_0502 - 3779551-3779562,3779863-3780012,3780129-3780172,378... 29 2.8
11_06_0092 + 19973364-19975983,19976272-19976648 29 3.7
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 29 3.7
05_04_0061 + 17582368-17582606,17582716-17583090,17593677-17594265 29 3.7
02_05_1006 + 33448476-33448915,33449016-33449083,33449681-334497... 29 3.7
01_06_0813 - 32165310-32165546,32165691-32165783,32166075-321662... 29 3.7
02_01_0299 + 2001938-2002510,2002821-2003033,2003129-2003333,200... 28 4.9
07_03_0537 - 19218461-19218982,19219482-19219868,19219993-192201... 28 6.5
11_06_0690 + 26303733-26306540 27 8.6
09_04_0676 - 19383757-19383890,19384308-19384415,19384493-193846... 27 8.6
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 27 8.6
03_06_0108 + 31708713-31709079,31709258-31709822,31709933-317100... 27 8.6
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 27 8.6
02_05_0226 + 26971851-26972034,26972734-26972834,26972876-269729... 27 8.6
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 116 bits (279), Expect = 1e-26
Identities = 68/174 (39%), Positives = 100/174 (57%), Gaps = 5/174 (2%)
Frame = +2
Query: 62 MASKGGLRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEG 241
MA + T + E E +GYV VSGPVV A+ M G+AMYELVRVG++ L+GEIIRLEG
Sbjct: 1 MAFGDRITTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEG 60
Query: 242 DMATTRYTKKLQV*L*VIQYSVLESLCQ*NLVPVSWVPSL--TVF-SVPSRTSTS*LKS- 409
D AT + ++ + + + V P + +F + T +KS
Sbjct: 61 DSATIQVYEETAGLMVNDPVLRTRKVMPAQPLSVELGPGILGNIFDGIQRPLKTIAIKSG 120
Query: 410 -IYIPKGINVPSLAREVDWEFNPLNVKVGSHIYRGDLYGIGHENTLVKHRMLVP 568
+YIP+G++VP+L ++ W F P + VG I GDLY I +ENTL++H++ +P
Sbjct: 121 DVYIPRGVSVPALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALP 174
Score = 74.1 bits (174), Expect = 8e-14
Identities = 38/50 (76%), Positives = 41/50 (82%), Gaps = 5/50 (10%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLRTGK-----PLSVELGPGILGSIFDGIQRPLKDI 390
QVYEET+G+ V DPVLRT K PLSVELGPGILG+IFDGIQRPLK I
Sbjct: 66 QVYEETAGLMVNDPVLRTRKVMPAQPLSVELGPGILGNIFDGIQRPLKTI 115
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 106 bits (255), Expect = 1e-23
Identities = 67/155 (43%), Positives = 88/155 (56%), Gaps = 3/155 (1%)
Frame = +2
Query: 113 RFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMATTRY---TKKLQV* 283
R G V AVSGPVV A+ M G+AMYELVRVG + L+GEIIRLEGD AT + T L V
Sbjct: 56 RIGGVLAVSGPVVVADGMGGAAMYELVRVGNDNLIGEIIRLEGDSATIQVYEETAGLMVN 115
Query: 284 L*VIQYSVLESLCQ*NLVPVSWVPSLTVFSVPSRTSTS*LKSIYIPKGINVPSLAREVDW 463
V++ S+ L P P +T +YIP+G++VP+L ++ W
Sbjct: 116 DPVLRTRKPLSV---ELGPGILGNIFDGIQRPLKTIAIKSGDVYIPRGVSVPALDKDQLW 172
Query: 464 EFNPLNVKVGSHIYRGDLYGIGHENTLVKHRMLVP 568
+F P + VG I GDLY ENTL+KH + +P
Sbjct: 173 DFEPKKLGVGDAITGGDLYATVFENTLMKHHVALP 207
Score = 81.8 bits (193), Expect = 4e-16
Identities = 38/45 (84%), Positives = 41/45 (91%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPLKDI 390
QVYEET+G+ V DPVLRT KPLSVELGPGILG+IFDGIQRPLK I
Sbjct: 104 QVYEETAGLMVNDPVLRTRKPLSVELGPGILGNIFDGIQRPLKTI 148
>11_01_0617 - 4939108-4939259,4939584-4940259
Length = 275
Score = 31.5 bits (68), Expect = 0.53
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 80 LRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEIIRLEGDMA 250
L +A EE+EER G F V+ + +A+++ VR+G LVG ++ + +A
Sbjct: 116 LLDMAMEEDEERGGARFRVADVLEKQNGRRETALHDAVRLGDERLVGHLMAVHPRLA 172
>07_01_1005 +
8509777-8509968,8510059-8510205,8510326-8510544,
8510652-8510761,8511337-8511391,8511447-8511631,
8512537-8512599,8513713-8513782,8514159-8514242,
8515925-8516159,8516213-8516517
Length = 554
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +3
Query: 378 PQGHQRADSSPSTSPRVS 431
P H RA SSPSTSPR S
Sbjct: 498 PSPHPRATSSPSTSPRCS 515
>01_07_0036 +
40647046-40647100,40647120-40647571,40648135-40648257,
40648407-40648461,40648613-40648722,40649352-40649531,
40650003-40650101,40651182-40651280,40652195-40652289,
40652290-40652378,40652739-40652901,40653299-40653404,
40655647-40655829,40656059-40656286,40656373-40656486
Length = 716
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 404 KSIYIPKGINVPSLAREVDWEFNPLNVKVGSHIYR--GDLYGIGHEN 538
KS+ IPKGI +PS D E + N K S R DL + H+N
Sbjct: 458 KSLKIPKGIKIPSYCNGCDCEGDCANNKNCSCAQRNGSDLPYVSHKN 504
>04_04_0028 -
22243272-22243577,22244564-22244713,22244919-22245656,
22247233-22247331,22247541-22247933,22248806-22248961
Length = 613
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 150 SLPKRCPDLLCTSWSVSVTMNSSVRLSVLKVTW 248
+ P CPDL+CT S + ++R SVL W
Sbjct: 210 AFPGCCPDLICTILS-KLPQKEAIRTSVLSSKW 241
>03_01_0502 -
3779551-3779562,3779863-3780012,3780129-3780172,
3780256-3780319,3780422-3780655,3780765-3780908,
3781027-3781221,3781447-3781522,3781689-3781788,
3781955-3781988,3782076-3782160,3782226-3782290,
3782380-3782478,3782810-3782875,3785485-3785721
Length = 534
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -3
Query: 353 EPKIPGPSSTDKGFPVRSTGSPTVTPEVSSYTW--WWPCHLQD 231
EP+ GP + KGF TG P+V V+ TW W+P L D
Sbjct: 288 EPEGTGPLAVLKGFRNLPTGMPSVL-IVTGLTWLSWFPFILYD 329
>11_06_0092 + 19973364-19975983,19976272-19976648
Length = 998
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 259 VYEETSGVTVGDPVLRTGKPLSVELGPGILGSIFDGIQRPL 381
V E +G+ D RTG L + PG+ G + D + R L
Sbjct: 894 VLETVTGMRPADSTFRTGLSLRQYVEPGLHGRLMDVVDRKL 934
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 158 EKMSGSAMYELVRVGYNELVGEI 226
EKMS + EL+ +GYN+L G I
Sbjct: 469 EKMSNLSSLELIDLGYNQLTGAI 491
>05_04_0061 + 17582368-17582606,17582716-17583090,17593677-17594265
Length = 400
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = -3
Query: 362 SKMEPKIPGPSSTDKGFPVRSTGSPTVTPEVSSYTWWWPC 243
S EP P S G+ R V+ E WWWPC
Sbjct: 15 STTEPAKSSPPSQRYGYLERIRNLSVVSAEAGR--WWWPC 52
>02_05_1006 +
33448476-33448915,33449016-33449083,33449681-33449751,
33449905-33450156,33450473-33450636,33450731-33450773,
33451044-33451161,33451384-33451481,33451550-33451594
Length = 432
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 497 GTRP*HLMG*IPSQPPWPGKAR 432
G RP MG PS PP PG++R
Sbjct: 33 GRRPASAMGQAPSSPPGPGRSR 54
>01_06_0813 -
32165310-32165546,32165691-32165783,32166075-32166218,
32166685-32166771,32166858-32167077,32167879-32168039
Length = 313
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1
Query: 214 EFIVTDTDQLVHSRSGHLFGSDDGSRYGEDISEPLL 107
EF+V +T++L H + G D+ + ED+ EPLL
Sbjct: 115 EFMVRETEKL-HQQVGRYKSPDEHPFFPEDLPEPLL 149
>02_01_0299 +
2001938-2002510,2002821-2003033,2003129-2003333,
2003485-2003560,2003665-2003800,2003905-2004009,
2004095-2004172,2004264-2004353,2004441-2004506,
2004836-2004892,2004996-2005073,2005165-2005212,
2005330-2005401
Length = 598
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 59 KMASKGGLRTIANEENEERFGYVFAVSGPVVTAEKMSGSAMYELVRVGYNELVGEII 229
K + G + T+A+ E EE+ G +F GP+ + G+ ++ VG +G I+
Sbjct: 124 KFSRLGQMSTVASPEQEEQEGVLFRGGGPMCDF-AVPGAQDTTVLVVGATSRIGRIV 179
>07_03_0537 -
19218461-19218982,19219482-19219868,19219993-19220154,
19220464-19221117,19221233-19221277,19223300-19223845,
19223930-19224307,19224642-19225313,19225373-19225456
Length = 1149
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 4/28 (14%)
Frame = +3
Query: 138 LDPSSLPKRC--PDLLCTS--WSVSVTM 209
+DP+S+PK C PD LC S W VS +
Sbjct: 856 VDPASIPKHCAAPDNLCFSRTWLVSFNL 883
>11_06_0690 + 26303733-26306540
Length = 935
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 127 DISEPLLILLIGDRPQTAFARHFELVILYPRRERWKRRTENG 2
D + PL + L+G RP+ + R + V+ Y R + +NG
Sbjct: 827 DFAAPLTMALLGRRPRPSRVRQRQQVVPYSPRRSNRLAAKNG 868
>09_04_0676 -
19383757-19383890,19384308-19384415,19384493-19384679,
19384937-19385143
Length = 211
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = -1
Query: 268 LRIPGGGHVTFKTDNLTDEFIVTDTDQLVHSRSGHLFGSDDGSRYGEDISEPLLILLIGD 89
+R P G + D ++D+F + +VH R H F + S Y E + +L+
Sbjct: 70 VRDPNGNQIHDSRDKISDKF-----EFIVHRRGVHRFCFTNKSPYHETVDFDVLVSHFSY 124
Query: 88 RPQTAFARHF 59
Q A HF
Sbjct: 125 YDQHAKDEHF 134
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 256 QVYEETSGVTVGDPVLR-TGKPLSVELGPGILGSIFDGIQRPL 381
QV+E TSG+ ++ TG+ L + +LG IF+G +P+
Sbjct: 111 QVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPI 153
>03_06_0108 +
31708713-31709079,31709258-31709822,31709933-31710015,
31710231-31710319,31710486-31710559,31710654-31710704,
31710807-31710883,31711454-31712031,31712388-31712555,
31713364-31713417,31713456-31713467,31713554-31713715
Length = 759
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 244 HGHHQVYEETSGVTVGDPVLRTGKPLSVELGPG 342
HGHHQ + + G GDP G L + PG
Sbjct: 156 HGHHQGHAQDGGAVGGDPHHGGGGFLQCAVIPG 188
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 74 GGLRTIANEENEERFGYVFAVSGPVV-TAEKMSGSA 178
GG RT E+ EE+ V V GP++ K SG A
Sbjct: 621 GGARTAEKEDYEEKLKEVEQVCGPIIKQVYKKSGDA 656
>02_05_0226 +
26971851-26972034,26972734-26972834,26972876-26972978,
26973335-26973477,26973525-26973605,26973929-26974015,
26974097-26974239,26974746-26974896,26974973-26975095,
26975362-26975445,26975531-26975718,26976726-26976900,
26977008-26977129,26977231-26977310,26977532-26977590,
26977921-26978075,26978680-26978858,26980050-26980162,
26980243-26980413,26980552-26980680,26980756-26980856,
26980942-26981059,26981739-26981818,26983230-26983302,
26983865-26983950,26984025-26984076,26984221-26984352,
26984560-26984628,26984912-26985004,26985806-26985901,
26986710-26986808,26986894-26986986,26987459-26987608,
26988391-26988549
Length = 1323
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 410 IYIPKGINVPSLAREVDWEFNPLNVKVGSHIYRGDLYGI 526
I IP+ I V + R + NP+N+ G H Y ++YGI
Sbjct: 644 IKIPEYIMVTNNGRTFNIVVNPVNISSGLHYY--EVYGI 680
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,574,019
Number of Sequences: 37544
Number of extensions: 423836
Number of successful extensions: 1162
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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