Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1492
         (419 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK098419-1|BAC05303.1|  132|Homo sapiens protein ( Homo sapiens ...    30   3.6  
BC003385-1|AAH03385.1|  374|Homo sapiens speckle-type POZ protei...    29   8.4  
BC001269-1|AAH01269.1|  374|Homo sapiens speckle-type POZ protei...    29   8.4  
AK222589-1|BAD96309.1|  374|Homo sapiens speckle-type POZ protei...    29   8.4  
AJ000644-1|CAA04199.1|  374|Homo sapiens SPOP protein.                 29   8.4  

>AK098419-1|BAC05303.1|  132|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25553 fis, clone JTH02483. ).
          Length = 132

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 301 LSAVGARLFERRWRDGGEPRAQXRCTTETRPSQKTGALH 417
           +S +G +  ER+W+ GG      RC  + +PS +    H
Sbjct: 78  VSGLGPQSKERKWKSGGREDVSVRCGWQKQPSGQPRERH 116


>BC003385-1|AAH03385.1|  374|Homo sapiens speckle-type POZ protein
           protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 363 PXPLHDXNTPVAENWCFTQ 419
           P P    + PVAE+WC+TQ
Sbjct: 8   PPPAEMSSGPVAESWCYTQ 26


>BC001269-1|AAH01269.1|  374|Homo sapiens speckle-type POZ protein
           protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 363 PXPLHDXNTPVAENWCFTQ 419
           P P    + PVAE+WC+TQ
Sbjct: 8   PPPAEMSSGPVAESWCYTQ 26


>AK222589-1|BAD96309.1|  374|Homo sapiens speckle-type POZ protein
           variant protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 363 PXPLHDXNTPVAENWCFTQ 419
           P P    + PVAE+WC+TQ
Sbjct: 8   PPPAEMSSGPVAESWCYTQ 26


>AJ000644-1|CAA04199.1|  374|Homo sapiens SPOP protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 363 PXPLHDXNTPVAENWCFTQ 419
           P P    + PVAE+WC+TQ
Sbjct: 8   PPPAEMSSGPVAESWCYTQ 26


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,185,211
Number of Sequences: 237096
Number of extensions: 645432
Number of successful extensions: 1212
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)