Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1490
         (606 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83221-2|CAB05708.1|  444|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z79754-12|CAD57695.1|  440|Caenorhabditis elegans Hypothetical p...    28   5.9  
Z79754-11|CAB02100.1|  478|Caenorhabditis elegans Hypothetical p...    28   5.9  
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U67953-6|ABA00176.1|  287|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>Z83221-2|CAB05708.1|  444|Caenorhabditis elegans Hypothetical
           protein C49A1.3 protein.
          Length = 444

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 535 DRFPNVLFSEAPFIQIWQFIFLVSC 461
           D +  ++FS  P + I QFIF+V C
Sbjct: 274 DTYLELVFSLFPLLTIMQFIFMVGC 298


>Z79754-12|CAD57695.1|  440|Caenorhabditis elegans Hypothetical
           protein F25H2.12b protein.
          Length = 440

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +2

Query: 464 RYKKNKLP-NLYKRSFTEENIWKSVNIQQEKNLXM 565
           R+ K K+  + Y RS+ E+ IWK   + +++N+ M
Sbjct: 300 RFLKQKIDLSRYARSYLEKWIWKVSELPEDRNIGM 334


>Z79754-11|CAB02100.1|  478|Caenorhabditis elegans Hypothetical
           protein F25H2.12a protein.
          Length = 478

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +2

Query: 464 RYKKNKLP-NLYKRSFTEENIWKSVNIQQEKNLXM 565
           R+ K K+  + Y RS+ E+ IWK   + +++N+ M
Sbjct: 338 RFLKQKIDLSRYARSYLEKWIWKVSELPEDRNIGM 372


>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical protein
            ZC116.3 protein.
          Length = 3871

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 86   YVCKWMLSVNVGNVGMYK 33
            Y CKW L+ NVG +  Y+
Sbjct: 1649 YTCKWYLAYNVGMLSFYE 1666


>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical protein
            ZC116.3 protein.
          Length = 3871

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 86   YVCKWMLSVNVGNVGMYK 33
            Y CKW L+ NVG +  Y+
Sbjct: 1649 YTCKWYLAYNVGMLSFYE 1666


>U67953-6|ABA00176.1|  287|Caenorhabditis elegans Hypothetical
           protein ZC13.10 protein.
          Length = 287

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = -2

Query: 374 KACLVCSSL----PVSCTISISNLLY*RQIAYPRFIHNTITISSII 249
           K CL C SL    P+ CT+ I  L Y  QIA   F    ++I+ I+
Sbjct: 113 KCCLGCISLRDAIPLICTVEIFALGYGAQIALSYFAFLFLSIAIIL 158


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,162,233
Number of Sequences: 27780
Number of extensions: 222036
Number of successful extensions: 464
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)