Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1488
         (547 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   1.5  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         21   6.2  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   8.2  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   8.2  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   8.2  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -2

Query: 177 IFIFVTYHRAAW 142
           I IFVT HR AW
Sbjct: 18  ILIFVTSHRPAW 29


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 499 KRTKAGNCEVGLCI 540
           +R K G+C  G+CI
Sbjct: 88  QRRKGGSCRNGVCI 101


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 466 LKKKDENENQLKRTKAGN 519
           LKK++EN+  LKR   G+
Sbjct: 15  LKKRNENDPFLKRPITGD 32


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 466 LKKKDENENQLKRTKAGN 519
           LKK++EN+  LKR   G+
Sbjct: 136 LKKRNENDPFLKRLITGD 153


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 256 VRFDTCAVPALVLNRVHRPVRRVCDAPRPARH 351
           V FD  +  A +LN     V R C   +P ++
Sbjct: 118 VSFDVLSCTASILNLCMISVDRFCAITKPLKY 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,102
Number of Sequences: 438
Number of extensions: 3563
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)