Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1485
         (698 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1448 + 33679110-33679140,33679858-33680057,33680163-336802...    30   2.0  
02_05_0258 + 27222058-27223198,27223297-27223460,27224399-272245...    30   2.0  
01_07_0123 + 41206782-41206844,41207701-41207782,41208587-412087...    29   2.7  
06_01_0972 - 7509148-7509516,7509748-7509887,7509968-7510035,751...    29   3.5  
02_04_0583 + 24078766-24079800,24080585-24081643                       28   8.2  

>04_04_1448 +
           33679110-33679140,33679858-33680057,33680163-33680272,
           33680372-33680591,33680672-33680794,33680892-33680960,
           33681915-33682157,33682235-33682297,33682414-33682477,
           33682740-33682810
          Length = 397

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 20/68 (29%), Positives = 34/68 (50%)
 Frame = +2

Query: 35  LRLRSFSL*FQIATMDLFIINRYNDTNDDTHIIEQEAKRLEQLKQRIEERXKAFSVKKSS 214
           LR+RSFS   + + M    I  + D   + H +EQEA     + +  + +  A S +K S
Sbjct: 24  LRVRSFSANGRASVMPFSYIRPHGDLESEIHQVEQEA--YTGVLRAFKVQSDAISWEKES 81

Query: 215 DVITLKEE 238
            +  L++E
Sbjct: 82  LITELRKE 89


>02_05_0258 +
           27222058-27223198,27223297-27223460,27224399-27224575,
           27224713-27224761,27224991-27225793
          Length = 777

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +2

Query: 278 MMICQRKYQNQIHLQNQKKKFMLKNTKNLKFLDQ 379
           + I ++K  +++  + + +  + KN+K LKFLDQ
Sbjct: 423 LYIWEKKLYDEVKAEEKMRLLLAKNSKRLKFLDQ 456


>01_07_0123 +
           41206782-41206844,41207701-41207782,41208587-41208717,
           41208758-41209147
          Length = 221

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
 Frame = +2

Query: 20  LIIVVLRLRSFSL*FQIATMDLFIINR---YNDTNDDTHIIEQEAKRLEQLKQRIE-ERX 187
           ++I    L +FSL +QI    LF+I++   +   N DT++I  EAK +E L  +++ +  
Sbjct: 96  IVIYHCILLNFSLHYQI----LFVISKPDVFKSPNSDTYVIFGEAK-IEDLSSQLQTQAA 150

Query: 188 KAFSVKKSSDVITLKE 235
           + F     S+VI+  E
Sbjct: 151 EQFKAPDLSNVISKAE 166


>06_01_0972 -
           7509148-7509516,7509748-7509887,7509968-7510035,
           7510504-7510548,7510657-7510676,7510828-7510890,
           7510979-7511190,7511238-7511334
          Length = 337

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/77 (22%), Positives = 36/77 (46%)
 Frame = +2

Query: 89  IINRYNDTNDDTHIIEQEAKRLEQLKQRIEERXKAFSVKKSSDVITLKEEKQTEIYLTXP 268
           +I++ N+ + + H++E+E K+       +         K++     + E KQ +     P
Sbjct: 188 LIDKVNNADAELHVLEEEYKKDLLHHDEVRRELADTQAKRALMEAVMGETKQLQELGEYP 247

Query: 269 FLLMMICQRKYQNQIHL 319
           FL  +   +K+ N +HL
Sbjct: 248 FLGFV---QKFSNSLHL 261


>02_04_0583 + 24078766-24079800,24080585-24081643
          Length = 697

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +2

Query: 119 DTHIIEQEAKRLEQLKQRIEERXKAFSVKKSSDVITLKEEKQ 244
           + H + QEAK +E   ++ EE+  A   +K      ++E K+
Sbjct: 264 EAHFVPQEAKPIEGKAKKAEEKLMAVDPRKGDPAPAMEEWKE 305


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,312,989
Number of Sequences: 37544
Number of extensions: 171382
Number of successful extensions: 391
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)