Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1485
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   2.3  
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    23   7.0  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/53 (22%), Positives = 30/53 (56%)
 Frame = +2

Query: 92  INRYNDTNDDTHIIEQEAKRLEQLKQRIEERXKAFSVKKSSDVITLKEEKQTE 250
           +N++   ++   +++   ++   L Q  EER +A + ++   + ++KE +QTE
Sbjct: 351 VNKHRLRDNSHQLVDALERQRAALAQ--EERNQARAAEEKDRIASIKEREQTE 401


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = +1

Query: 364 KVLGSSDFQKKSKVQRILPYWLS--HPTVVSRDLNELSCPXEEXEWLXPVKSLLY*AKAL 537
           K + S  +QK+   +RILP+  S  HP +   DL          EW    K +L+  K L
Sbjct: 207 KTMTSELYQKECLQKRILPFIRSHDHPVMFWPDLASCHYSKVVREWYAE-KGVLFVPKNL 265


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,363
Number of Sequences: 2352
Number of extensions: 9040
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)