Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1485
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50109-4|CAA90441.1|  382|Caenorhabditis elegans Hypothetical pr...    31   0.79 
Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AF077537-14|AAC26283.1|  556|Caenorhabditis elegans Hypothetical...    29   3.2  
Z80223-6|CAI79238.1|  143|Caenorhabditis elegans Hypothetical pr...    28   5.6  

>Z50109-4|CAA90441.1|  382|Caenorhabditis elegans Hypothetical
           protein C09H10.6 protein.
          Length = 382

 Score = 31.1 bits (67), Expect = 0.79
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +2

Query: 104 NDTNDDTHIIEQEAKRLEQLKQRIEERXKAFSVKKSSDVITLKEEKQTEIY 256
           N T  +   +EQ+ KRL +L        K   + K+SD ++   E  +EIY
Sbjct: 26  NGTTTEEETVEQKEKRLAELLAAGRRALKVNDIDKASDSLSEATELSSEIY 76


>Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical
           protein C17H1.9 protein.
          Length = 353

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 134 EQEAKRLEQLKQRIEERXKAFSVKKSSDVITLKEEKQTEI 253
           EQ+ K +EQ + ++EE+     VK    +  L E+K  EI
Sbjct: 105 EQDVKEVEQQRVKLEEQRTEDLVKHHESMANLSEKKYKEI 144


>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical protein
            C18C4.5b protein.
          Length = 1046

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 23/92 (25%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
 Frame = +2

Query: 128  IIEQEAKRLEQLKQRIEERXKAFSVKKS--SDVITLKEEKQTEIYLTXPFLLMMICQRKY 301
            ++ Q+ ++ E+ K+R+EE+ ++ + + S  S  I+  E+K +E+  T   L + +  +K 
Sbjct: 782  VLNQKIEKSEKEKERLEEQIRSHTSQNSDTSKTISDLEDKISELLKTNDLLALDV--QKL 839

Query: 302  QNQIHLQNQKKKFMLKNTKNLKFLDQVTFKKN 397
               +  ++Q+ K   ++ KNL  L++V   +N
Sbjct: 840  SKSLDSKDQQLK-EAEDEKNL-MLEEVQALQN 869


>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical protein
            C18C4.5a protein.
          Length = 1022

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 23/92 (25%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
 Frame = +2

Query: 128  IIEQEAKRLEQLKQRIEERXKAFSVKKS--SDVITLKEEKQTEIYLTXPFLLMMICQRKY 301
            ++ Q+ ++ E+ K+R+EE+ ++ + + S  S  I+  E+K +E+  T   L + +  +K 
Sbjct: 782  VLNQKIEKSEKEKERLEEQIRSHTSQNSDTSKTISDLEDKISELLKTNDLLALDV--QKL 839

Query: 302  QNQIHLQNQKKKFMLKNTKNLKFLDQVTFKKN 397
               +  ++Q+ K   ++ KNL  L++V   +N
Sbjct: 840  SKSLDSKDQQLK-EAEDEKNL-MLEEVQALQN 869


>AF077537-14|AAC26283.1|  556|Caenorhabditis elegans Hypothetical
           protein F16G10.15 protein.
          Length = 556

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 80  DLFIINRYNDTNDDTHIIEQEAKRLEQLKQR-IEERXKAFSVKKSSDVITLKE 235
           D F +N+ N +ND  HI + +   L  L  + IE+R +  ++ ++  V   KE
Sbjct: 316 DTFNLNKSNYSNDMFHIFKNQKNALSDLSLKFIEDRKELINLNENPYVELFKE 368


>Z80223-6|CAI79238.1|  143|Caenorhabditis elegans Hypothetical
           protein F26D10.13 protein.
          Length = 143

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
 Frame = +2

Query: 104 NDTNDDTHIIEQEAKRLEQLKQRIEERXKAFSVKKSSDVITLKEEKQTEIYL--TXPFLL 277
           +D+N +    +   K +E LK+ +E+     + KKS+  +T K  K    Y      FLL
Sbjct: 49  HDSNFNFKFCKVSGKSVEDLKKILEQDPNMSTTKKSNHFVTSKVTKDGANYKFDYEEFLL 108

Query: 278 MMICQ-RKYQNQIHLQNQKKKFMLKNTK 358
           +   +  K +  I+ Q+  K  ++K T+
Sbjct: 109 LKNDEFYKAEGTIYFQDAPKVKIMKATE 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,533,241
Number of Sequences: 27780
Number of extensions: 177943
Number of successful extensions: 506
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)