Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1483
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 190 1e-48
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 190 1e-48
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 113 1e-25
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 113 1e-25
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 95 3e-20
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 94 1e-19
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 90 1e-18
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 84 8e-17
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 84 8e-17
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 84 8e-17
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 83 1e-16
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 80 1e-15
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 72 3e-13
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 68 7e-12
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 66 2e-11
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 64 1e-10
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 62 5e-10
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 61 6e-10
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 60 1e-09
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 55 4e-08
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 54 1e-07
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 46 3e-05
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 41 7e-04
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 36 0.037
U42834-3|AAA83583.2| 860|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 30 1.4
Z54236-10|CAA90986.1| 407|Caenorhabditis elegans Hypothetical p... 29 3.2
Z54235-12|CAA90977.1| 407|Caenorhabditis elegans Hypothetical p... 29 3.2
AF016686-4|AAB66238.1| 381|Caenorhabditis elegans Hypothetical ... 29 3.2
Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z82053-3|CAB04837.2| 240|Caenorhabditis elegans Hypothetical pr... 28 7.3
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 190 bits (462), Expect = 1e-48
Identities = 82/113 (72%), Positives = 96/113 (84%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDI 432
+I+ W A+IFGP +TPFEDGTFKL++EFTEEYPNKPPTV+F+SKMFHPNVYADG ICLDI
Sbjct: 32 NILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDI 91
Query: 433 LQNRWSPTYDVSAILTSIQSLLSDPTQTLQQIPMAAQLYKENRREYRKESESV 591
LQNRWSPTYDV+AILTSIQSLL +P +AAQLY+ENRREY K + +
Sbjct: 92 LQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQI 144
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/34 (85%), Positives = 32/34 (94%), Gaps = 1/34 (2%)
Frame = +2
Query: 161 MSTPARRRLMRDFKRLQEDPPTGVSGAPT-DNIL 259
M+TP+RRRLMRDFK+LQEDPP GVSGAPT DNIL
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAPTEDNIL 34
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 190 bits (462), Expect = 1e-48
Identities = 82/113 (72%), Positives = 96/113 (84%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDI 432
+I+ W A+IFGP +TPFEDGTFKL++EFTEEYPNKPPTV+F+SKMFHPNVYADG ICLDI
Sbjct: 32 NILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDI 91
Query: 433 LQNRWSPTYDVSAILTSIQSLLSDPTQTLQQIPMAAQLYKENRREYRKESESV 591
LQNRWSPTYDV+AILTSIQSLL +P +AAQLY+ENRREY K + +
Sbjct: 92 LQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRVQQI 144
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/34 (85%), Positives = 32/34 (94%), Gaps = 1/34 (2%)
Frame = +2
Query: 161 MSTPARRRLMRDFKRLQEDPPTGVSGAPT-DNIL 259
M+TP+RRRLMRDFK+LQEDPP GVSGAPT DNIL
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAPTEDNIL 34
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 113 bits (272), Expect = 1e-25
Identities = 47/104 (45%), Positives = 69/104 (66%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNR 444
W A I GP ++P++ G F LTI F +YP KPP V F ++++HPN+ ++G ICLDIL+++
Sbjct: 33 WQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ 92
Query: 445 WSPTYDVSAILTSIQSLLSDPTQTLQQIPMAAQLYKENRREYRK 576
WSP +S +L SI SLL DP +P A++YK +R Y +
Sbjct: 93 WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQ 136
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 113 bits (272), Expect = 1e-25
Identities = 47/104 (45%), Positives = 69/104 (66%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNR 444
W A I GP ++P++ G F LTI F +YP KPP V F ++++HPN+ ++G ICLDIL+++
Sbjct: 33 WQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ 92
Query: 445 WSPTYDVSAILTSIQSLLSDPTQTLQQIPMAAQLYKENRREYRK 576
WSP +S +L SI SLL DP +P A++YK +R Y +
Sbjct: 93 WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQ 136
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 95.5 bits (227), Expect = 3e-20
Identities = 45/107 (42%), Positives = 65/107 (60%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDILQNR 444
++ +I GP D+PF G FKL + EEYP P VRF++K++HPN+ G ICLDIL+++
Sbjct: 36 FHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDILKDK 95
Query: 445 WSPTYDVSAILTSIQSLLSDPTQTLQQIPMAAQLYKENRREYRKESE 585
WSP + +L SIQ+LLS P A+ +K N E K ++
Sbjct: 96 WSPALQIRTVLLSIQALLSAPNPEDPLATDVAEQWKTNEAEAIKTAK 142
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 93.9 bits (223), Expect = 1e-19
Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 13/124 (10%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL--- 435
W +I GP +T F +G F I F ++YP PP +RF +FHPN+YADG +C+ IL
Sbjct: 37 WECLITGPEETCFANGVFPARITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAP 96
Query: 436 ----------QNRWSPTYDVSAILTSIQSLLSDPTQTLQQIPMAAQLYKENRREYRKESE 585
RWSP + IL S+ S+L++P AA++++E+R ++ K ++
Sbjct: 97 GDDPTGYELSNERWSPVQSIEKILLSVVSMLAEPNDESPANVSAAKMWREDRAQFEKIAD 156
Query: 586 SVCR 597
S+ R
Sbjct: 157 SLVR 160
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 161 MSTPARRRLMRDFKRLQEDPPTGVSGAPTD 250
M+ A +RLM ++K L PP G+ AP D
Sbjct: 1 MAGYALKRLMTEYKELTTRPPEGIIAAPID 30
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 90.2 bits (214), Expect = 1e-18
Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 13/118 (11%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL--- 435
W ++ GP DT +E G FK ++F +YP KPP ++F+S+++HPN+ +G +C+ IL
Sbjct: 36 WEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDP 95
Query: 436 ----------QNRWSPTYDVSAILTSIQSLLSDPTQTLQQIPMAAQLYKENRREYRKE 579
+ RW P + V IL S+ S+L+DP AA++ +EN E++K+
Sbjct: 96 GDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFKKK 153
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 84.2 bits (199), Expect = 8e-17
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-QN 441
W I G DT +E G +++ + F +++P+ PP +F +FHPNVY G +CL +L +N
Sbjct: 41 WECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEN 100
Query: 442 R-WSPTYDVSAILTSIQSLLSDPTQTLQQIPMAAQLYKENRREYRK 576
+ W P+ + +L IQ LL+ P A Q+Y +NR EY K
Sbjct: 101 KDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEK 146
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 84.2 bits (199), Expect = 8e-17
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-QN 441
W I G DT +E G +++ + F +++P+ PP +F +FHPNVY G +CL +L +N
Sbjct: 41 WECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDEN 100
Query: 442 R-WSPTYDVSAILTSIQSLLSDPTQTLQQIPMAAQLYKENRREYRK 576
+ W P+ + +L IQ LL+ P A Q+Y +NR EY K
Sbjct: 101 KDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEK 146
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 84.2 bits (199), Expect = 8e-17
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = +1
Query: 277 IFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGG-ICLDILQNRWSP 453
I GP DTP+ G F L I+ ++YP PP V+F +K++HPNV + G ICLDIL+++W+
Sbjct: 43 IRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAA 102
Query: 454 TYDVSAILTSIQSLLSDPTQTLQQIPMAAQLYKENRREYRKESE 585
+ + +L SIQ+L+ P Q + A+ Y E ++ +E
Sbjct: 103 SLTLRTVLLSIQALMCTPEPKDPQDAVVAKQYMEKPAVFKATAE 146
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 83.4 bits (197), Expect = 1e-16
Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 13/122 (10%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDI 432
++ +W I+GP T ++ G FK +I F YP PP+++F +K++HPNVY +G +C+ I
Sbjct: 38 NLFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISI 97
Query: 433 LQN-------------RWSPTYDVSAILTSIQSLLSDPTQTLQQIPMAAQLYKENRREYR 573
L + RW+PT V IL S+ SLL++P + A+ +Y++ + +
Sbjct: 98 LHSPIDDPQSGELACERWNPTQSVRTILLSVISLLNEPNTSSPANVDASVMYRKWKEDQD 157
Query: 574 KE 579
E
Sbjct: 158 PE 159
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Frame = +1
Query: 283 GPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNV-YADGGICLDILQNRWSPTY 459
GP DT +E+G +++ ++ ++YP K P++ F++K+FHPN+ A G +CLD++ W+ Y
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALY 100
Query: 460 DVSAIL-TSIQSLLSDPTQTLQQIPMAAQLYKENRREYRK 576
D++ I T + LL+ P AA+LY EYR+
Sbjct: 101 DLTNIFDTFLPQLLTYPNAADPLNGEAARLYIHKPEEYRR 140
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 72.1 bits (169), Expect = 3e-13
Identities = 33/116 (28%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDI 432
+++ W ++ P P+ G FK+ I F +YP KPP V F +K++HPNV +G CL I
Sbjct: 31 NLLKWTVLLI-PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLPI 89
Query: 433 L-QNRWSPTYDVSAILTSIQSLLSDPTQTLQQIPMAAQLYKENRREYRKESESVCR 597
+ W P ++ ++ SL+++P + A+ ++++ +++ K +E R
Sbjct: 90 VTAENWKPATKTEQVMMALLSLINEPEPSHPIRADVAEEFQKDHKKFMKTAEEHTR 145
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 67.7 bits (158), Expect = 7e-12
Identities = 36/118 (30%), Positives = 65/118 (55%), Gaps = 16/118 (13%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTV---------------RFVSKM 387
++M I GP TP+ GTF++ ++ E YP +PP V +FV+++
Sbjct: 49 NLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRI 108
Query: 388 FHPNVYADGG-ICLDILQNRWSPTYDVSAILTSIQSLLSDPTQTLQQIPMAAQLYKEN 558
+HPN+ + G ICLDIL+++W+ + + +L S+Q++L P + Q + A+ + N
Sbjct: 109 WHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINN 166
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = +1
Query: 274 VIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYA-DGGICL-DILQNRW 447
+I G +TP+E G F+L I+ E YP K PTV+F++K++HP+V DG ICL D+ W
Sbjct: 384 IIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGVW 443
Query: 448 SPTYDVSAILTSIQSLLSD 504
+ + +L IQS +S+
Sbjct: 444 PVSMTIYKVLIVIQSWMSN 462
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Frame = +1
Query: 286 PHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL------QNRW 447
P + + G F+ I EY N PP V+ ++K++HPN+ DG ICL IL Q W
Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGW 126
Query: 448 SPTYDVSAILTSIQSLLSDPTQTLQQIPM-AAQLYKENRREY 570
PT +++ ++ + SL +D + + AAQ++ +NR +
Sbjct: 127 RPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESF 168
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 61.7 bits (143), Expect = 5e-10
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL-QN 441
W + GP +P+E G +++++ F ++P PP F + + HPNV G I L +L Q
Sbjct: 71 WICTVPGPRGSPWEGGEYEVSVNF-HKWPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQE 129
Query: 442 RWSPTYDVSAILTSIQSLLSDPTQTLQQIPMAAQLYKENRRE-YRKESESVCRTI 603
WS + +L I +LL+ P T Q + A + EN+RE Y ++ + T+
Sbjct: 130 HWSSETSLKKLLREISNLLATPDLT-QAANIEAWMEYENQRENYEAKARAYAWTV 183
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 61.3 bits (142), Expect = 6e-10
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMF--HPNVYADGGICLDILQ 438
W + G T + F L F +YP P V FV + HP++Y++G ICL IL
Sbjct: 38 WKIGVVGAEGTLYAGEVFMLQFTFGPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILS 97
Query: 439 NRWSPTYDVSAILTSIQSLLS 501
+ W+P V ++ SI S+LS
Sbjct: 98 DDWTPALSVQSVCLSILSMLS 118
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 60.1 bits (139), Expect = 1e-09
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 12/91 (13%)
Frame = +1
Query: 262 IWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSK-----MFHPNVYADGGICL 426
I +I GP DTP+ +G F+ I F YP PP F++ F+PN+Y DG ICL
Sbjct: 444 IIKVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICL 503
Query: 427 DIL-------QNRWSPTYDVSAILTSIQSLL 498
IL + +W+P + +L SIQ ++
Sbjct: 504 SILGTWEGRPEEKWNPYCSLMQVLVSIQEVI 534
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 55.2 bits (127), Expect = 4e-08
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGIC----LDI 432
W A I GP TP+E + L I+ YP +PPTVRF +K+ V G+ L
Sbjct: 41 WTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGVIDKRNLTT 100
Query: 433 LQNRWSPTYDVSAILTSIQS--LLSDPTQTLQQ 525
L+N WS +Y + +L I+ +++ LQQ
Sbjct: 101 LRN-WSNSYMIKTVLEDIRKNMMMAKENLKLQQ 132
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/120 (24%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDI 432
+I+ W +I G TP+E G + + F +++P KPP + ++ + + +CL I
Sbjct: 36 NILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKPPAILMLTP--NGRFQTNTRLCLSI 93
Query: 433 LQ---NRWSPTYDVSAILTSIQSLLSDPTQTLQQIPMA---AQLYKENRREYRKESESVC 594
+ W+P + VS I+T + S ++D TL + + +L + +++ + +S C
Sbjct: 94 SDYHPDTWNPAWTVSTIITGLMSFMNDNQPTLGSLVTSESERKLLAKKSKQWNLKDKSFC 153
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Frame = +1
Query: 301 FEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNV-YADGGICLD-ILQNRWSPTYDVSAI 474
+++ F LT++ EYP KPP ++F ++HPNV +C +LQ W P + +
Sbjct: 57 YKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTMEDV 116
Query: 475 LTSIQSLLSDPTQTLQQIPMAAQLYKENRREYRKESESVCR 597
L ++ LL++P + AA Y N+ E+ K+S + +
Sbjct: 117 LLNLIVLLNEPDLSRPVNIDAAHDYIHNKVEFVKKSTELAK 157
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Frame = +1
Query: 253 HIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDI 432
+I+ W+ + G DTPF G + + F E +P PP + ++ + + +CL I
Sbjct: 47 NILEWHYCLRGSPDTPFYGGYYWGKVIFKENFPWSPPAITMITP--NGRFQTNTRLCLSI 104
Query: 433 LQ---NRWSPTYDVSAILTSIQSLLSDPTQTLQQI---PMAAQLYKENRREY 570
W+P + VSAIL + S +++ + I P ++Y +E+
Sbjct: 105 SDYHPESWNPGWTVSAILIGLHSFMNENSPAAGSIAGTPQDQRMYAAASKEF 156
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 164 STPARRRLMRDFKRLQEDPPTGVSGAPT-DNIL 259
S+ A RRL +D+ +L +DP G+ P DNIL
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKALPNEDNIL 49
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 41.1 bits (92), Expect = 7e-04
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 277 IFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRF 375
I GP DTP+E G F++ + F + YPN P ++F
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKF 67
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 35.5 bits (78), Expect = 0.037
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGGICLDIL--- 435
W+ I G T FE G + I F +YP KPP + ++ + + +CL I
Sbjct: 41 WHFTIRGTLGTDFEGGIYHGRIIFPADYPMKPPNLILLTP--NGRFELNKKVCLSISGYH 98
Query: 436 QNRWSPTYDV-SAILTSIQSLLSDPTQTLQQIPMAAQLYKENRREYRKESESVCR 597
W P++ + +A+L I L S P L + KE +R + E C+
Sbjct: 99 PETWLPSWSIRTALLALIGFLPSTPGGALGSLDYPP---KERQRLAKLSCEWKCK 150
>U42834-3|AAA83583.2| 860|Caenorhabditis elegans Hypothetical
protein F28B4.2 protein.
Length = 860
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 7/58 (12%)
Frame = -1
Query: 351 WIFFCKFYCEFECSIFKWSIMRAKYHSIPD-------HNMLSVGAPDTPVGGSSCKRL 199
W FF E EC I + HS PD +MLS G+ TPV S+ RL
Sbjct: 477 WFFFLPCLDENECFNRSLEIEKPPMHSTPDLSSSRINSSMLSNGSQSTPVKNSTLSRL 534
>Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical
protein B0464.2 protein.
Length = 1150
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Frame = +1
Query: 382 KMFHPNVYADGGI-CLDILQNRWSPTYDVSAILTSIQSLLSDPTQTLQQIPM-------A 537
K+ N+YA GI C+ + W+ DV + + S D + + M A
Sbjct: 672 KLQPKNMYAANGIGCVLAYKRNWNDARDVFSQVRESTSEFYDVWLNIAHVCMEREQWMAA 731
Query: 538 AQLYKENRREYRKESESVCRTIIYWISRGHY 630
Q+Y +++RKE++S T+ +++++ +Y
Sbjct: 732 VQMYSSAMKKFRKENDS---TLQHYLAKAYY 759
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 265 WNAVIFGPHDTPFEDGTFKLTI 330
W A I GP ++P++ G F LTI
Sbjct: 33 WQATIMGPPESPYQGGIFFLTI 54
>Z54236-10|CAA90986.1| 407|Caenorhabditis elegans Hypothetical
protein C09G9.6 protein.
Length = 407
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -2
Query: 413 PSA*TFG*NIFDTNRTVGGLFGYSSVNSIVSLNVPSS--NGVS*GPNITAFQIIICYQLE 240
P+A +FG + T GG+ GYSS S S ++ SS N S F Q
Sbjct: 313 PNAGSFG--MLGKQNTPGGVSGYSSAGSTPSQDLSSSSLNAASAAAAAAYFANSAVAQSL 370
Query: 239 LLTHL*VDPLVSV*NPSS 186
L+ + DP++S P S
Sbjct: 371 LMKSVATDPMMSCNGPFS 388
>Z54235-12|CAA90977.1| 407|Caenorhabditis elegans Hypothetical
protein C09G9.6 protein.
Length = 407
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -2
Query: 413 PSA*TFG*NIFDTNRTVGGLFGYSSVNSIVSLNVPSS--NGVS*GPNITAFQIIICYQLE 240
P+A +FG + T GG+ GYSS S S ++ SS N S F Q
Sbjct: 313 PNAGSFG--MLGKQNTPGGVSGYSSAGSTPSQDLSSSSLNAASAAAAAAYFANSAVAQSL 370
Query: 239 LLTHL*VDPLVSV*NPSS 186
L+ + DP++S P S
Sbjct: 371 LMKSVATDPMMSCNGPFS 388
>AF016686-4|AAB66238.1| 381|Caenorhabditis elegans Hypothetical
protein R07C3.8 protein.
Length = 381
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +1
Query: 457 YDVSAILTSIQSLLSDPTQTLQQIPMAAQLYKENRREYRKESESVCRTIIYWISRGH 627
+++S + +L +P + L A+ + EN ++ SE V I W S GH
Sbjct: 248 FNISHPIFQTALILKNPNENLFGAASASNVRVENNEQFSSLSERVVDLIRIWQSHGH 304
>Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 268 NAVIFG-PHDTPFEDGTFKLTIEFTEEYPNKPPTVR 372
N FG P D P +GT K +F + + ++PPT +
Sbjct: 90 NKTDFGTPLDLPGMNGTSKAAFKFLDAFTSQPPTTK 125
>Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 268 NAVIFG-PHDTPFEDGTFKLTIEFTEEYPNKPPTVR 372
N FG P D P +GT K +F + + ++PPT +
Sbjct: 90 NKTDFGTPLDLPGMNGTSKAAFKFLDAFTSQPPTTK 125
>Z82053-3|CAB04837.2| 240|Caenorhabditis elegans Hypothetical
protein T26E3.4 protein.
Length = 240
Score = 27.9 bits (59), Expect = 7.3
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +1
Query: 292 DTPFEDGTFKLTIEFTEEYPNKPP--TVRFVSKMFHPNVYADGGICLDILQNRWSPTYDV 465
D +D +L IEFTE YP++ P T+ + F A+ +D L++ +
Sbjct: 46 DPTDDDFDVELGIEFTENYPDEIPIITLNGIEDAFTAERIAES---IDKLRSVAEENLGM 102
Query: 466 SAILTSIQSLLSDPTQTLQQIPMAAQLYKENRREYRKESES 588
++ +I S L D L + A+ K + +KE+ES
Sbjct: 103 -VMVFAIVSALQDEIGELVDVKKRAKEEKVEIEKEKKEAES 142
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,863,479
Number of Sequences: 27780
Number of extensions: 370114
Number of successful extensions: 1043
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -