Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1480
(369 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41558-4|AAK39246.1| 117|Caenorhabditis elegans Ribosomal prote... 77 3e-15
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 0.79
Z81486-10|CAB03993.3| 681|Caenorhabditis elegans Hypothetical p... 29 0.79
Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical pr... 29 1.0
L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription f... 29 1.0
AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical ... 29 1.0
AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical ... 29 1.0
Z81509-4|CAB04152.2| 236|Caenorhabditis elegans Hypothetical pr... 28 1.8
AF016449-12|AAG24004.2| 365|Caenorhabditis elegans Serpentine r... 27 3.2
AF016428-2|AAO26002.1| 316|Caenorhabditis elegans Serpentine re... 27 3.2
AF016450-6|AAB65982.1| 311|Caenorhabditis elegans Serpentine re... 27 4.2
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 27 5.5
U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily ass... 27 5.5
U00048-11|AAB53833.1| 995|Caenorhabditis elegans Hypothetical p... 27 5.5
DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein. 27 5.5
Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical pr... 26 7.3
AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical... 26 7.3
AF024492-4|AAF98617.1| 848|Caenorhabditis elegans Hypothetical ... 26 9.7
>U41558-4|AAK39246.1| 117|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 25 protein.
Length = 117
Score = 77.4 bits (182), Expect = 3e-15
Identities = 38/55 (69%), Positives = 44/55 (80%)
Frame = +2
Query: 104 VRDKLNNQVLFDKPTYEKLFKEVPQYKLITPAXVSERLKVRGSLARRALIDLGKK 268
VRDKLNN VLFD+ TY+KL+KEV YKLITP+ VSERLKVR SLA+ L +L K
Sbjct: 36 VRDKLNNMVLFDQATYDKLYKEVITYKLITPSVVSERLKVRASLAKAGLKELQAK 90
Score = 44.0 bits (99), Expect = 3e-05
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +1
Query: 256 LREKGLIKQVVQHHGQVIYTRATKGDD 336
L+ KGL+K VV HHGQV+YTRATK D
Sbjct: 87 LQAKGLVKCVVHHHGQVVYTRATKEAD 113
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.5 bits (63), Expect = 0.79
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 3 RTRRLXPNSLXKHRRRRKDPVAAKPRRRSGPKEK 104
R RR S + RRR+ P AA PRRR P+ +
Sbjct: 465 RRRRSPSGSKSRSPRRRRSPAAA-PRRRQSPQRR 497
>Z81486-10|CAB03993.3| 681|Caenorhabditis elegans Hypothetical
protein C53A5.13 protein.
Length = 681
Score = 29.5 bits (63), Expect = 0.79
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 1 EGREGXGQTASXNTEEEGRIRWRQSQEEEVVQRK 102
E REG G + RIRW+ +EE+V R+
Sbjct: 25 EDREGDGVDVIEVRNDAIRIRWKHDSDEEIVTRQ 58
>Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 119 NNQVLFDKPTYEKLFKEVPQYKLITPAXVSERLKVRGSLARRALIDLGKKVSSNR*SNT 295
NN+ L + PT K + P + +ITP +R S A + G V S+ S+T
Sbjct: 368 NNRYLSEYPTSTKNGERAPGFNMITPLENIQRYNGSSSSATAVVTATGSAVVSSTPSST 426
>Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 119 NNQVLFDKPTYEKLFKEVPQYKLITPAXVSERLKVRGSLARRALIDLGKKVSSNR*SNT 295
NN+ L + PT K + P + +ITP +R S A + G V S+ S+T
Sbjct: 372 NNRYLSEYPTSTKNGERAPGFNMITPLENIQRYNGSSSSATAVVTATGSAVVSSTPSST 430
>Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 119 NNQVLFDKPTYEKLFKEVPQYKLITPAXVSERLKVRGSLARRALIDLGKKVSSNR*SNT 295
NN+ L + PT K + P + +ITP +R S A + G V S+ S+T
Sbjct: 368 NNRYLSEYPTSTKNGERAPGFNMITPLENIQRYNGSSSSATAVVTATGSAVVSSTPSST 426
>Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 119 NNQVLFDKPTYEKLFKEVPQYKLITPAXVSERLKVRGSLARRALIDLGKKVSSNR*SNT 295
NN+ L + PT K + P + +ITP +R S A + G V S+ S+T
Sbjct: 372 NNRYLSEYPTSTKNGERAPGFNMITPLENIQRYNGSSSSATAVVTATGSAVVSSTPSST 430
>L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription
factor protein.
Length = 459
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 119 NNQVLFDKPTYEKLFKEVPQYKLITPAXVSERLKVRGSLARRALIDLGKKVSSNR*SNT 295
NN+ L + PT K + P + +ITP +R S A + G V S+ S+T
Sbjct: 372 NNRYLSEYPTSTKNGERAPGFNMITPLENIQRYNGSSSSATAVVTATGSAVVSSTPSST 430
>AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 119 NNQVLFDKPTYEKLFKEVPQYKLITPAXVSERLKVRGSLARRALIDLGKKVSSNR*SNT 295
NN+ L + PT K + P + +ITP +R S A + G V S+ S+T
Sbjct: 368 NNRYLSEYPTSTKNGERAPGFNMITPLENIQRYNGSSSSATAVVTATGSAVVSSTPSST 426
>AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 119 NNQVLFDKPTYEKLFKEVPQYKLITPAXVSERLKVRGSLARRALIDLGKKVSSNR*SNT 295
NN+ L + PT K + P + +ITP +R S A + G V S+ S+T
Sbjct: 372 NNRYLSEYPTSTKNGERAPGFNMITPLENIQRYNGSSSSATAVVTATGSAVVSSTPSST 430
>Z81509-4|CAB04152.2| 236|Caenorhabditis elegans Hypothetical
protein F21A3.6 protein.
Length = 236
Score = 28.3 bits (60), Expect = 1.8
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +2
Query: 149 YEKLFKEVPQYKLITP---AXVSERLKVRGSLARRA---LIDLGKKVSSNR*SNTMGR*S 310
+ +LF E P+YKLI P A L L R A L LGK + S R +G+
Sbjct: 112 FVRLFSEYPRYKLIWPQFRAIPDSSLMNAVELRRHASVYLNGLGKIIDSMRDEEALGKSM 171
Query: 311 TRV 319
+R+
Sbjct: 172 SRI 174
>AF016449-12|AAG24004.2| 365|Caenorhabditis elegans Serpentine
receptor, class t protein71 protein.
Length = 365
Score = 27.5 bits (58), Expect = 3.2
Identities = 22/82 (26%), Positives = 35/82 (42%)
Frame = -1
Query: 351 SLCEWIIALGRTRVDHLPMVLDYLFDETFFPKSMSALLAREPRTFNLSDTXAGVISLYCG 172
S+C ++A+ R + L+ LF F P+ L +P T N +LYC
Sbjct: 118 SVCSILLAIERCVEINPHFPLEMLFLLNFQPE----LYECQPDTINNIVLVLCTSTLYCY 173
Query: 171 TSLNSFSYVGLSNNTWLFNLSR 106
S + G S ++WL+ R
Sbjct: 174 ISYHLLFNFGYSTSSWLYKSKR 195
>AF016428-2|AAO26002.1| 316|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 65 protein.
Length = 316
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 255 SMSALLAREPRTFNLSDTXAGVISLYCG 172
S++ ++ E F+LSDT ++ L+CG
Sbjct: 2 SVNRTISLENGKFDLSDTIVNIVELFCG 29
>AF016450-6|AAB65982.1| 311|Caenorhabditis elegans Serpentine
receptor, class t protein67 protein.
Length = 311
Score = 27.1 bits (57), Expect = 4.2
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = -2
Query: 356 IIVYANGS----SPLVARV*ITCPWCWTTCLMRPFSLSR*VLFSPGNLG 222
++++AN +PLV ++ + C CW + +++ ++FSP + G
Sbjct: 118 VLIFANSMEIRITPLVVKMIVVCIVCWVLFVFIAGCITQNLMFSPPSWG 166
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -2
Query: 122 CSTCHELFLWTTSSSWLCRHRILPSSSVFXEAVWPKPSRP 3
C + F+ + C +LP+ S+ E PKP RP
Sbjct: 44 CRMQDDCFIGEICDNGFCCPNVLPTFSLQREPTSPKPKRP 83
>U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 326 protein.
Length = 560
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 42 RRRRKDPVAAKPRRRSGP 95
RRR+ P+ A PRRR P
Sbjct: 478 RRRQSSPMVASPRRRRSP 495
>U00048-11|AAB53833.1| 995|Caenorhabditis elegans Hypothetical
protein C05D11.1 protein.
Length = 995
Score = 26.6 bits (56), Expect = 5.5
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 104 VRDKLNNQVLFDKPTYEKLFKEVPQYKLITPAXVSERL-KVRGSL 235
V K N +LFD+ EKL +++ + + P V E+L +VR +L
Sbjct: 688 VYGKNTNCILFDELVLEKLHEKISKDVMKNPEAVLEKLEQVRSAL 732
>DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein.
Length = 560
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 42 RRRRKDPVAAKPRRRSGP 95
RRR+ P+ A PRRR P
Sbjct: 478 RRRQSSPMVASPRRRRSP 495
>Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical
protein F19H8.5 protein.
Length = 514
Score = 26.2 bits (55), Expect = 7.3
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -2
Query: 356 IIVYANGSSPLVARV*ITCPWCWTTCLMRPFSLSR*VLFSPGNLGPL 216
+I N SPL+ + PW ++ + PF LS L SP PL
Sbjct: 377 VIFSPNIFSPLILNPSVLSPWIFSPAVPLPFILSP-YLLSPYIFSPL 422
>AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical
protein Y73B6BL.1 protein.
Length = 751
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/33 (36%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Frame = -2
Query: 140 YQTTPGCS----TCHELFLWTTSSSWLCRHRIL 54
YQ CS TC F W W CR R++
Sbjct: 365 YQPVRHCSEQDATCDSPFYWCDMKLWRCRSRVV 397
>AF024492-4|AAF98617.1| 848|Caenorhabditis elegans Hypothetical
protein F14F9.3 protein.
Length = 848
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 110 DKLNNQVLFDKPTYEK 157
++L NQVLFDKP EK
Sbjct: 32 EELANQVLFDKPRGEK 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,603,037
Number of Sequences: 27780
Number of extensions: 175491
Number of successful extensions: 478
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 478
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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