Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1477
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      83   2e-18
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          70   2e-14
AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.      38   7e-05
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.7  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              23   3.7  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   6.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   6.4  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 83.0 bits (196), Expect = 2e-18
 Identities = 34/70 (48%), Positives = 51/70 (72%)
 Frame = +3

Query: 228 VGCRRQVIAAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 407
           + C  + + AH++VLS CSPYF+E+ K  P +HP++ L+DV+ S L  L++F+Y GEVNV
Sbjct: 36  LACDGRSLKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDVAFSDLHALVEFIYHGEVNV 95

Query: 408 KQEELASFIK 437
            Q  L+SF+K
Sbjct: 96  HQRSLSSFLK 105



 Score = 45.2 bits (102), Expect = 6e-07
 Identities = 35/138 (25%), Positives = 59/138 (42%)
 Frame = +1

Query: 124 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQHIN*FYQYVLPIFKKC 303
           M   + F L WNN+ +++++ F  L    D VDVTLA +GR L+          P F++ 
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFREL 60

Query: 304 SK*IQHNIR*YF*KMLVILH*ETYYSLCIKVKLMLSKKN*HHLLSTAEQLQVKGLTGNQN 483
            K           + +               ++ + +++    L TAE L+V GLT  Q 
Sbjct: 61  LKSTPCKHPVIVLQDVAFSDLHALVEFIYHGEVNVHQRSLSSFLKTAEVLRVSGLT--QQ 118

Query: 484 EESSTPSKQSRLRGQAPG 537
            + +   + S +R  A G
Sbjct: 119 ADQTDRDELSHVRALAAG 136


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 69.7 bits (163), Expect = 2e-14
 Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
 Frame = +3

Query: 228 VGCRRQVIAAHKLVLSVCSPYFQEMFKMNPTQHP-IVFLKDVSHSALRDLLQFMYQGEVN 404
           + C    + AHK+VLS CS YFQ++   NP +HP I+  +DV  + L+ +++F+Y+GE++
Sbjct: 40  LACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEID 99

Query: 405 VKQEELASFIK 437
           V Q EL S +K
Sbjct: 100 VSQAELQSLLK 110



 Score = 38.7 bits (86), Expect = 5e-05
 Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 2/136 (1%)
 Frame = +1

Query: 136 EQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAEGRLLQHIN*FYQYVLPIFKKC--SK 309
           + + L WNN+ +NM++ FH LL     VDVTLA     L+            F+K   S 
Sbjct: 9   QHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSN 68

Query: 310 *IQHNIR*YF*KMLVILH*ETYYSLCIKVKLMLSKKN*HHLLSTAEQLQVKGLTGNQNEE 489
             +H       + +     +       + ++ +S+     LL TA+QL++KGL       
Sbjct: 69  PCKHPTI-IMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESR 127

Query: 490 SSTPSKQSRLRGQAPG 537
              PS       + PG
Sbjct: 128 DGPPSVSLSSPPREPG 143


>AB095513-1|BAC76335.1|   39|Apis mellifera brood-complex protein.
          Length = 39

 Score = 38.3 bits (85), Expect = 7e-05
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 124 MASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTLAAE 240
           M   + F L WNN+ +++++ F  L    D VDVTLA E
Sbjct: 1   MVDTQHFCLRWNNYQSSITSAFENLRDDEDFVDVTLACE 39


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 100 VPRRVVAIMASDEQFSLCWNNFHANMSAGFHGLLSRGDLVDVTL 231
           V R +VA++ +   F +CW  FHA      +   S+    DV +
Sbjct: 283 VIRMLVAVVVA---FFICWAPFHAQRLLAVYAQNSKDKPEDVLI 323


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 372 LLQFMYQGEVNVKQEELASFIK 437
           ++  +Y G VNV+ E + S+++
Sbjct: 43  IIDEVYNGNVNVEDENVQSYVE 64


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 101 FHVESSLSWRRTNNFHY 151
           +   +S SWR TNN  Y
Sbjct: 211 YDFRNSRSWRITNNLFY 227


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = -2

Query: 553 CLCCDDL-GPG 524
           C CCD+L GPG
Sbjct: 13  CWCCDNLGGPG 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,911
Number of Sequences: 438
Number of extensions: 3989
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)