Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1473
         (697 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2732|AAN11752.1|  739|Drosophila melanogaster CG13035-P...    50   4e-06
AE014296-2731|AAF49466.1|  717|Drosophila melanogaster CG13035-P...    50   4e-06
AY122174-1|AAM52686.1|  877|Drosophila melanogaster LD34142p pro...    31   1.1  
AE014296-2433|AAF49702.1| 2061|Drosophila melanogaster CG9425-PA...    31   1.1  
AE014296-2432|AAS65008.1| 2103|Drosophila melanogaster CG9425-PB...    31   1.1  
AY060249-1|AAL25288.1|  239|Drosophila melanogaster GH07389p pro...    31   1.5  
AE013599-772|AAF58998.1|  474|Drosophila melanogaster CG8084-PA ...    31   1.5  

>AE014296-2732|AAN11752.1|  739|Drosophila melanogaster CG13035-PB,
           isoform B protein.
          Length = 739

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 21/63 (33%), Positives = 36/63 (57%)
 Frame = +3

Query: 411 FEDEQEMRFVYSVIYDVFRYKCVLDQXMDDIEFWXDYPQXTGKPSHKFWLFLDGVSETSL 590
           F++E EMR  +S+IYDVFRYK V+   + D+ F+ ++ +       + WL L  + +   
Sbjct: 140 FQNEHEMRLAFSLIYDVFRYKVVMSNALADVSFFEEHTELK-NDEQRIWLMLFELYDRQF 198

Query: 591 XGQ 599
            G+
Sbjct: 199 KGR 201



 Score = 29.5 bits (63), Expect = 4.6
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +2

Query: 338 GPVWDIGQVLKAARLLCKPPQQVDFRG--RTRNAFRLFCYL*RFPI*M 475
           G  W +  +  AA+LL KPP  VDF+     R AF L   + R+ + M
Sbjct: 116 GARWTLPTIANAAKLLRKPPILVDFQNEHEMRLAFSLIYDVFRYKVVM 163


>AE014296-2731|AAF49466.1|  717|Drosophila melanogaster CG13035-PA,
           isoform A protein.
          Length = 717

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 21/63 (33%), Positives = 36/63 (57%)
 Frame = +3

Query: 411 FEDEQEMRFVYSVIYDVFRYKCVLDQXMDDIEFWXDYPQXTGKPSHKFWLFLDGVSETSL 590
           F++E EMR  +S+IYDVFRYK V+   + D+ F+ ++ +       + WL L  + +   
Sbjct: 140 FQNEHEMRLAFSLIYDVFRYKVVMSNALADVSFFEEHTELK-NDEQRIWLMLFELYDRQF 198

Query: 591 XGQ 599
            G+
Sbjct: 199 KGR 201



 Score = 29.5 bits (63), Expect = 4.6
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +2

Query: 338 GPVWDIGQVLKAARLLCKPPQQVDFRG--RTRNAFRLFCYL*RFPI*M 475
           G  W +  +  AA+LL KPP  VDF+     R AF L   + R+ + M
Sbjct: 116 GARWTLPTIANAAKLLRKPPILVDFQNEHEMRLAFSLIYDVFRYKVVM 163


>AY122174-1|AAM52686.1|  877|Drosophila melanogaster LD34142p
           protein.
          Length = 877

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +2

Query: 257 PEEWAPWSFVVPAKNPH--APPPVSVKTTGP 343
           P +  PWS + P+K P    PPPVS    GP
Sbjct: 240 PPQTNPWSVLPPSKQPQQPQPPPVSAPGRGP 270


>AE014296-2433|AAF49702.1| 2061|Drosophila melanogaster CG9425-PA,
            isoform A protein.
          Length = 2061

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +2

Query: 257  PEEWAPWSFVVPAKNPH--APPPVSVKTTGP 343
            P +  PWS + P+K P    PPPVS    GP
Sbjct: 1424 PPQTNPWSVLPPSKQPQQPQPPPVSAPGRGP 1454


>AE014296-2432|AAS65008.1| 2103|Drosophila melanogaster CG9425-PB,
            isoform B protein.
          Length = 2103

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +2

Query: 257  PEEWAPWSFVVPAKNPH--APPPVSVKTTGP 343
            P +  PWS + P+K P    PPPVS    GP
Sbjct: 1466 PPQTNPWSVLPPSKQPQQPQPPPVSAPGRGP 1496


>AY060249-1|AAL25288.1|  239|Drosophila melanogaster GH07389p
           protein.
          Length = 239

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
 Frame = +3

Query: 126 RMHRSHASKNQINNMRPMILEDRTXFTSLTNDDSEQQQKPVEEHRR--SGHRGASWCLRR 299
           R H +H      +    +  E        +  +SEQQ +P+  H R  +GH      L +
Sbjct: 160 RHHHNHQQPESESESAQLEAEIEAEELMSSASNSEQQMEPISNHHRHRTGHHHPHHQLHQ 219

Query: 300 ILMHHHR 320
              HHHR
Sbjct: 220 HHHHHHR 226


>AE013599-772|AAF58998.1|  474|Drosophila melanogaster CG8084-PA
           protein.
          Length = 474

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
 Frame = +3

Query: 126 RMHRSHASKNQINNMRPMILEDRTXFTSLTNDDSEQQQKPVEEHRR--SGHRGASWCLRR 299
           R H +H      +    +  E        +  +SEQQ +P+  H R  +GH      L +
Sbjct: 395 RHHHNHQQPESESESAQLEAEIEAEELMSSASNSEQQMEPISNHHRHRTGHHHPHHQLHQ 454

Query: 300 ILMHHHR 320
              HHHR
Sbjct: 455 HHHHHHR 461


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,850,409
Number of Sequences: 53049
Number of extensions: 602150
Number of successful extensions: 1748
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1746
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)