Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1472
(598 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0843 + 28126480-28127007,28127092-28127457,28129388-281294... 32 0.001
11_06_0499 + 24354810-24355212,24355677-24355735,24355846-243559... 34 0.075
06_03_0226 - 18420293-18420697 33 0.17
02_05_0512 + 29675835-29675901,29676681-29676813,29677020-296771... 33 0.23
12_02_0528 + 20059613-20061472 31 0.53
12_02_0230 + 15973390-15974645,16002878-16003097 31 0.92
05_05_0060 - 22015440-22015481,22015572-22015709,22016704-220167... 30 1.2
03_02_0982 + 12925861-12926211,12926309-12926378,12927190-129272... 30 1.2
02_05_0146 - 26267245-26267339,26267427-26267469,26267589-262677... 30 1.2
10_08_0308 + 16660751-16661450,16661656-16661819,16662615-166628... 29 2.1
07_01_0323 - 2264356-2264650,2265519-2266294 29 2.1
01_05_0502 + 22771428-22771466,22772327-22772430,22773043-227731... 29 2.1
01_03_0308 - 14883728-14884120 29 2.1
10_08_0351 - 17069974-17070232,17070470-17071751,17071908-170719... 29 2.8
08_01_0756 - 7161089-7161452,7161589-7161995 29 2.8
09_04_0005 + 13612060-13612291,13612381-13612510,13612726-136129... 29 3.7
03_02_0613 - 9848514-9848539,9848942-9849200,9849326-9849365,984... 29 3.7
07_03_1616 - 28167872-28168303 28 4.9
04_04_0293 - 24189344-24189350,24189804-24190026,24190411-241905... 28 4.9
09_04_0512 + 18226981-18227143,18227648-18229555,18229649-182302... 28 6.5
04_04_0825 + 28443961-28444099,28444527-28444603,28444710-284447... 28 6.5
04_04_0169 + 23266110-23266439,23267208-23267288,23267399-232675... 28 6.5
01_05_0627 + 23802235-23802853,23803357-23803430,23804207-238043... 28 6.5
12_01_0737 - 6588612-6588922,6595261-6596602,6596639-6596749 27 8.6
09_02_0060 + 3729613-3729863,3730377-3730392 27 8.6
08_02_1462 + 27308792-27308924,27309711-27309778,27309854-273101... 27 8.6
07_03_0543 + 19272389-19272534,19273337-19273496,19273584-192737... 27 8.6
06_03_0365 + 19918003-19918401 27 8.6
04_04_0999 - 30002433-30003279,30003384-30003513,30003620-30003758 27 8.6
04_04_0361 + 24701275-24701350,24702565-24703068,24703158-24703711 27 8.6
>03_05_0843 +
28126480-28127007,28127092-28127457,28129388-28129487,
28130266-28130546,28130643-28130705,28131276-28131431,
28131913-28132080,28132158-28132298,28132714-28132840,
28132888-28132994,28134142-28134372,28134446-28134559,
28135091-28135261
Length = 850
Score = 31.9 bits (69), Expect(2) = 0.001
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +2
Query: 83 PGQPARGEAHLAAAVICPSDEDSKTFTINCASGDMLKLRATDARARQEWVDGLRAIAGYT 262
P +P GE HL + + S D + F+I + L LRA R WV+ L+A
Sbjct: 166 PRKPI-GEIHLKVSSVRESRSDDRRFSIFSGT-KRLHLRAETREDRAAWVEALQATKEMF 223
Query: 263 PR 268
PR
Sbjct: 224 PR 225
Score = 27.9 bits (59), Expect(2) = 0.001
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 8 RWFAVDPETGVLSYYLYDGPGDTIQPGQPARG 103
RWFA+ GVLSYY GP + + RG
Sbjct: 106 RWFAL--HDGVLSYYKIHGPDRIVLSRETERG 135
>11_06_0499 +
24354810-24355212,24355677-24355735,24355846-24355929,
24356040-24356337,24357026-24357203,24357686-24357746,
24358209-24358391,24358581-24358742,24358844-24359037,
24359354-24359504,24359551-24359578,24359845-24360117,
24360660-24360724
Length = 712
Score = 34.3 bits (75), Expect = 0.075
Identities = 23/46 (50%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -1
Query: 334 PTPWRRGPRAALSAAGAGWPPSPWCVSSNGPEPVD--PLLARAGVG 203
PTP RR P AA +AA A PP P+ VSS P P L RA G
Sbjct: 20 PTPRRRLPFAA-AAAAAAAPPRPFLVSSPPPPPAPRARLARRAAAG 64
>06_03_0226 - 18420293-18420697
Length = 134
Score = 33.1 bits (72), Expect = 0.17
Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = -1
Query: 358 RSLVAAAWPTP----WRRGPRAALSAAGAGWPPSPWCVSSNGPEPVDPLLARAGVGSSQL 191
R + AAA PT WRRGPR A SAAG G V E + + G S++
Sbjct: 36 RVVAAAATPTTSTCGWRRGPRPAQSAAGDGVAAGEGDVYVEELEMMKMMGIPVGFDSTKG 95
Query: 190 QHVAGRAVYG 161
+HV V G
Sbjct: 96 KHVPDADVSG 105
>02_05_0512 +
29675835-29675901,29676681-29676813,29677020-29677164,
29677586-29678407
Length = 388
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/53 (30%), Positives = 19/53 (35%)
Frame = -1
Query: 280 WPPSPWCVSSNGPEPVDPLLARAGVGSSQLQHVAGRAVYGEGLGVFVAWAYHC 122
W PS WC P P RAG+ AG + G+ V W C
Sbjct: 160 WSPSRWCCPRGSRIPRSPWQIRAGIDKQGAAADAGELLSGQVKAVRKPWRSRC 212
>12_02_0528 + 20059613-20061472
Length = 619
Score = 31.5 bits (68), Expect = 0.53
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = -1
Query: 307 AALSAAGAGWP-----PSPWCVSSNGPEPVDPLLARAGVGS 200
A L A WP P+PW + G EP+ PL+ A GS
Sbjct: 25 AGLGELLAAWPSLADEPAPWYTPARGAEPLTPLMVAAVYGS 65
>12_02_0230 + 15973390-15974645,16002878-16003097
Length = 491
Score = 30.7 bits (66), Expect = 0.92
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 79 TAWTAGQGGGSFSCSSDMPKRRRLQDLHHKLRVRRHVEA 195
TA+T G G SC S+ P++ L L H R RR EA
Sbjct: 414 TAFTTS-GNGDLSCPSNFPRKEAL--LRHAFRARRFPEA 449
>05_05_0060 -
22015440-22015481,22015572-22015709,22016704-22016799,
22016911-22017135
Length = 166
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 91 AGQGGGSFSCSSDMPKRRRLQDLHHK 168
AG+GG +D+P+ RRL+DL K
Sbjct: 48 AGEGGAEADADADLPELRRLRDLEAK 73
>03_02_0982 +
12925861-12926211,12926309-12926378,12927190-12927287,
12927467-12927615,12928083-12928198,12928521-12928617,
12929122-12929206,12929303-12929365,12929505-12929645
Length = 389
Score = 30.3 bits (65), Expect = 1.2
Identities = 26/70 (37%), Positives = 31/70 (44%)
Frame = -1
Query: 367 H*VRSLVAAAWPTPWRRGPRAALSAAGAGWPPSPWCVSSNGPEPVDPLLARAGVGSSQLQ 188
H + AA + RGPR A SA A SPW S G +P + +R VG S
Sbjct: 7 HLAACVARAAASSSRLRGPRPAASALVAPLLASPW-EPSGGGQPHWLVPSRGHVGHSH-H 64
Query: 187 HVAGRAVYGE 158
H G V GE
Sbjct: 65 HHHGEEVGGE 74
>02_05_0146 -
26267245-26267339,26267427-26267469,26267589-26267725,
26268172-26268299,26268419-26268495,26268593-26268679,
26268817-26268933,26269115-26269165,26269383-26269497,
26270033-26270292
Length = 369
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = -1
Query: 334 PTPWRRGPRAALSAAGAGWPPSPWCVSSNGPEPVDPLLARAGVGSSQ 194
P P RR A+ +AA G P P SS+ P P P A G G Q
Sbjct: 36 PLPARRWRVASSAAASGGSPDLPSSSSSSSPPPT-PAAASFGSGDEQ 81
>10_08_0308 +
16660751-16661450,16661656-16661819,16662615-16662800,
16663297-16663533
Length = 428
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Frame = -1
Query: 382 ARGPRH*VRSLVAAAWPTPWRR------GPRAALSAAGA-GWPPSPWCVSSNGPEPVDPL 224
ARG H R + A PT W + G R L+A + P+PW + G EP+ PL
Sbjct: 103 ARGAPH--RMPLLANGPTLWYQLDDDVAGLRELLAACPSLADEPAPWYSLARGTEPLTPL 160
Query: 223 LARAGVGS 200
+ GS
Sbjct: 161 MVATAYGS 168
>07_01_0323 - 2264356-2264650,2265519-2266294
Length = 356
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/50 (34%), Positives = 20/50 (40%)
Frame = -1
Query: 349 VAAAWPTPWRRGPRAALSAAGAGWPPSPWCVSSNGPEPVDPLLARAGVGS 200
VA A T WRR + + G G PP V P P L G+ S
Sbjct: 55 VAVAKETGWRRDAKITVRGRGHGNPPRALVVRPLPLLPPSPFLRNRGISS 104
>01_05_0502 +
22771428-22771466,22772327-22772430,22773043-22773129,
22773212-22773287,22773393-22773467,22773639-22773692,
22773745-22773918,22774002-22774061,22774135-22774251,
22774448-22774542,22774811-22775013,22775177-22775274,
22775451-22775587,22776154-22776219,22776300-22776465,
22776537-22776659,22776763-22776845,22776943-22777084,
22777334-22777363,22777587-22777657,22777742-22778333
Length = 863
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +1
Query: 340 QQLQATELSDAALARCIESSDSPFPHTDPDLLLLKATSAASMQLPAAVPGPCCIASTVRH 519
Q L+ T++ + +A SSDSP H + +L T A L A + P + RH
Sbjct: 244 QWLENTDVLEM-IADKFSSSDSPEVHANAAEILCAVTRCAPPSLAAKICSPSFVGRLFRH 302
Query: 520 A 522
A
Sbjct: 303 A 303
>01_03_0308 - 14883728-14884120
Length = 130
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +1
Query: 322 AMASARQQLQATELSDAALARCIESSDSPFPHTDPDLLLLKATSAASMQLPAAVPG 489
AMA++R AT L + +S SPFP T P ++ + T A ++ AV G
Sbjct: 22 AMAASRTDTGATALPSPSPIENSTASRSPFPTTSPSMIDEQTTERAP-EIGGAVAG 76
>10_08_0351 -
17069974-17070232,17070470-17071751,17071908-17071969,
17072109-17072181,17072399-17072466,17073023-17073207,
17073311-17073452,17073665-17073720,17074003-17074056,
17074679-17074782,17075012-17075112,17075717-17075790,
17076482-17076560,17076668-17076744,17076875-17076931,
17077058-17077168,17077254-17077334
Length = 954
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 316 GPRAALSAAGAG-WPPSPWCVSSNGPEPVDPLLARAGV 206
GP+ A + G G P P+ +S NGPE V L GV
Sbjct: 508 GPQMAKATNGLGSQEPIPYLLSKNGPENVGKFLYLEGV 545
>08_01_0756 - 7161089-7161452,7161589-7161995
Length = 256
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = -1
Query: 421 PCEGRENLKTLCSARGPRH*VRSLVAAAWPTPWRRG--PRAALSAAGAGWPPSPWC-VSS 251
PC + L A+G +RS P R G P A+ SA+ WP W ++
Sbjct: 2 PCNRHQELIRSVHAKGESQRLRSGFGRTLDWPNRPGFWPAASSSASIISWPKCGWIGLNK 61
Query: 250 NGPEPVDPLLA 218
+P+ LLA
Sbjct: 62 GSADPIWALLA 72
>09_04_0005 +
13612060-13612291,13612381-13612510,13612726-13612926,
13613086-13613185,13613513-13613559,13613871-13613964,
13614042-13614192,13614777-13614923,13614994-13615067,
13615288-13615376,13615840-13615954,13616104-13616301
Length = 525
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1
Query: 304 ALSAAGAGWPPSPWCVSSNGPEPVDPLLARA 212
A++A GA WPP V S P P P A A
Sbjct: 37 AVAALGALWPPRLVAVESRPPPPSSPASASA 67
>03_02_0613 -
9848514-9848539,9848942-9849200,9849326-9849365,
9849952-9850117,9850228-9850756
Length = 339
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = -1
Query: 346 AAAWPTPWRRGPRAALSAAGAGWPPSPWCV--SSNGPEPVDPLLARAGVGSSQLQH 185
A A P+P P A++ G P PW S+ P P P A G Q+
Sbjct: 163 APALPSPHHHQPAPAIAVGSRGVSPVPWYYHPSTTPPPPPPPAAHYAAHGGHHQQY 218
>07_03_1616 - 28167872-28168303
Length = 143
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -1
Query: 307 AALSAAGAGWPPSPWCVSSNGPEPVDPLLAR--AGVGSSQLQHVAGRAV 167
AAL+ +GA P SS P P PLLAR + SS+L R +
Sbjct: 29 AALAGSGALLPRLDGVPSSPSPSPAPPLLARSFSATSSSRLPREFSRTL 77
>04_04_0293 -
24189344-24189350,24189804-24190026,24190411-24190529,
24191331-24191578
Length = 198
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
Frame = -1
Query: 382 ARGPRH*VRSLVAAAWPTPWRRGP-----RAALSAAGAGWPPSPWCVSSNGPEPVDP 227
A P R AAA P P P +A +AA + PSP S P PV P
Sbjct: 22 ATAPAGPARKAPAAAGPAPKATAPAGPAPKATATAAPSSKAPSPAAPSPEAPSPVAP 78
>09_04_0512 +
18226981-18227143,18227648-18229555,18229649-18230295,
18230710-18231949,18232085-18232419,18232500-18232577,
18232872-18232978,18233020-18233062
Length = 1506
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 556 CSLSECLEETVKRGVLCWRCSTAQALQQATACW-PQTSPSKVTNQDPC 416
CS+ L + V+ G+L +T L+Q C P SP+ N+DPC
Sbjct: 346 CSVGSSLVDGVELGLLSTDSAT---LKQHLQCGSPDLSPTHSRNKDPC 390
>04_04_0825 +
28443961-28444099,28444527-28444603,28444710-28444758,
28445283-28445367,28445506-28445755,28447053-28447373
Length = 306
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = -2
Query: 201 ALSFNMSPDAQFMVKVLESSSLGH--ITAAAK*ASPLAGCPGCIVSPG 64
+LS ++ PD + M + S S ++++++ S +G GC+V+PG
Sbjct: 247 SLSLSLGPDPKCMPAIASSPSESSCILSSSSRSFSDCSGNSGCLVAPG 294
>04_04_0169 +
23266110-23266439,23267208-23267288,23267399-23267538,
23267815-23268070
Length = 268
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = -2
Query: 303 LSRLQG--RVGPHHLGVYPAMA-LSPSTHSW 220
LSRL G R GPHH VY A A L P S+
Sbjct: 18 LSRLAGAARFGPHHCAVYAANAFLGPDLGSF 48
>01_05_0627 +
23802235-23802853,23803357-23803430,23804207-23804364,
23804640-23804964
Length = 391
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -1
Query: 415 EGRENLKTLCSARGPRH*VRSL-VAAAWPTPWRRGPRAALSAAGAGWPPSP 266
+GR T CSA H S +++ P PW R R A + A PP P
Sbjct: 47 KGRRT-STACSAERLSHVKSSTRTSSSRPAPWWRRSRMAAAVAVTSSPPRP 96
>12_01_0737 - 6588612-6588922,6595261-6596602,6596639-6596749
Length = 587
Score = 27.5 bits (58), Expect = 8.6
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = -1
Query: 331 TPWRRGPR---AALSAAGAGWPPSPWCVSSNGPEPVDPLLARAGVGSSQLQHVAGR 173
TPWR R A S AG G P + NGP VDP A ++ V GR
Sbjct: 488 TPWRLRARLSHARPSPAGRGL--LPLAMRGNGPTHVDPAEATVADKVGLVEAVCGR 541
>09_02_0060 + 3729613-3729863,3730377-3730392
Length = 88
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 406 PFPHTDPDLLLLKATSAASMQLPAAVPGPCCI 501
P P T LLL A SA +LP AV GP +
Sbjct: 2 PLPATAVLLLLCIAASAVHCRLPLAVVGPLLV 33
>08_02_1462 +
27308792-27308924,27309711-27309778,27309854-27310159,
27310168-27310839
Length = 392
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2
Query: 279 GPHHLGVYPAMALSPSTHSWRARASVALSFNMSPDAQF 166
G HL V +AL P WR R +N+ D +F
Sbjct: 96 GVTHLAVGDRVALEPGISCWRCRHCKGGRYNLCEDMKF 133
>07_03_0543 +
19272389-19272534,19273337-19273496,19273584-19273741,
19273852-19273945,19274082-19274198,19275119-19275229,
19275309-19275396,19275615-19275718,19275796-19275867,
19275950-19276039,19276151-19276308,19276746-19276752,
19277140-19277194,19277273-19277421,19277543-19277664,
19277916-19278105
Length = 606
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = -1
Query: 313 PRAALSAAGAGWP---PSPWCVSSNGPEPVDPLL 221
P AA +AA A P PSP + P P+DP+L
Sbjct: 12 PEAAAAAAAASSPLRRPSPRVLREVPPPPLDPIL 45
>06_03_0365 + 19918003-19918401
Length = 132
Score = 27.5 bits (58), Expect = 8.6
Identities = 23/78 (29%), Positives = 29/78 (37%)
Frame = -1
Query: 361 VRSLVAAAWPTPWRRGPRAALSAAGAGWPPSPWCVSSNGPEPVDPLLARAGVGSSQLQHV 182
V SL A R P A A A W S P P + G+++ +
Sbjct: 18 VSSLSVRAEADQVARAPALAPDVAAASWVQQG---SQEAAAPGRPGMGMGKNGAARWRRT 74
Query: 181 AGRAVYGEGLGVFVAWAY 128
AGR G G G AWA+
Sbjct: 75 AGRRGRGGGGGGTGAWAF 92
>04_04_0999 - 30002433-30003279,30003384-30003513,30003620-30003758
Length = 371
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 134 PSDEDSKTFTINCASGDMLKLRATDARARQEWVD 235
PS S T T NC+SGD ++ ++ +E D
Sbjct: 143 PSPSSSTTTTTNCSSGDSAGEQSNTSKEEEEETD 176
>04_04_0361 + 24701275-24701350,24702565-24703068,24703158-24703711
Length = 377
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 361 LSDAALARCIESSDSPFPHTDPDLLLLKATSAASMQLPAAVPG 489
+SD +C++S+ PH + L+ A MQ VPG
Sbjct: 235 MSDTKAVKCVDSAHFTVPHGARAVELVSGLETALMQEVRTVPG 277
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,519,809
Number of Sequences: 37544
Number of extensions: 406122
Number of successful extensions: 1853
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1847
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -