Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1471
         (678 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1100 + 30894575-30895012,30896082-30897044                       30   2.0  
12_02_0876 - 23926691-23928090,23928184-23928919,23929048-23929272     29   2.6  
11_06_0183 - 20999343-20999865,21000351-21000748                       29   3.4  
02_05_0294 + 27609656-27611305                                         29   4.5  
11_06_0667 + 26071774-26072070,26072352-26073153,26073209-260734...    28   6.0  
02_03_0164 - 15862166-15862366,15862443-15862508,15862754-158630...    28   6.0  
08_02_0236 + 14652034-14652225,14652311-14652527,14652561-146532...    28   7.9  

>04_04_1100 + 30894575-30895012,30896082-30897044
          Length = 466

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 274 GIESCTGRGTGSGGKNSAMYAVTLRARQTEIL 369
           G+  C G G GSGG  + + A TL+A   ++L
Sbjct: 49  GVFFCYGAGEGSGGGGALLPAATLKAALAKVL 80


>12_02_0876 - 23926691-23928090,23928184-23928919,23929048-23929272
          Length = 786

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +3

Query: 54  QIVPLEWPKLKKNLINITFQHYLPTSNPSAQ 146
           Q V + W K + N IN +  HYLP  NP  Q
Sbjct: 322 QNVSMGWFKQEPNGINFSAAHYLPRCNPFNQ 352


>11_06_0183 - 20999343-20999865,21000351-21000748
          Length = 306

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -1

Query: 213 PEYEGQDDNDSWLLHRQKFLEETEQK 136
           P+++G+DD  +WL H ++F   TE +
Sbjct: 94  PKFDGKDDPLNWLNHCEQFFFRTENR 119


>02_05_0294 + 27609656-27611305
          Length = 549

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 598 NLSLAIXYHGS-WVKGMPKGTGCFVFDTDCM 509
           NL+L +   G  W KG+ K TG F    DC+
Sbjct: 272 NLNLVLFLFGYIWFKGVHKRTGGFALSADCL 302


>11_06_0667 +
           26071774-26072070,26072352-26073153,26073209-26073411,
           26075078-26075521,26075703-26075758,26076323-26076402,
           26077098-26077174,26077279-26078301
          Length = 993

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 191 IMILGCCTGKSSWRKLSRRIRCWE 120
           I + GCCT +   RK+   I CW+
Sbjct: 208 IRLFGCCTERQYKRKIKLSIWCWK 231


>02_03_0164 -
           15862166-15862366,15862443-15862508,15862754-15863029,
           15864869-15864989,15865091-15865368
          Length = 313

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 296 EELVQEARTPPCMQSRCVLAKLR 364
           + L+  +R PP   S+CVLA+LR
Sbjct: 51  QSLLSASRPPPLFTSKCVLAELR 73


>08_02_0236 +
           14652034-14652225,14652311-14652527,14652561-14653208,
           14653374-14654364,14654532-14654703
          Length = 739

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 300 SSAGTRFDTIPDKRKLETDLLVFEPPSLAPEYEGQD 193
           +S GT  + +P      TDL +FE PS A + E Q+
Sbjct: 528 ASVGTEIEEVPGLEWDGTDLEIFEDPSPAKDPEVQE 563


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,896,630
Number of Sequences: 37544
Number of extensions: 307114
Number of successful extensions: 805
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)