Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1468
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100656-7|AAF99964.2|  615|Caenorhabditis elegans Hypothetical ...    27   9.8  
AF067217-5|AAO38635.1|  856|Caenorhabditis elegans Hypothetical ...    27   9.8  
AF067217-4|AAF99978.1|  887|Caenorhabditis elegans Hypothetical ...    27   9.8  
AF000265-2|AAO38667.1|  887|Caenorhabditis elegans Paz/piwi doma...    27   9.8  
AF000265-1|AAB52946.2|  913|Caenorhabditis elegans Paz/piwi doma...    27   9.8  

>AF100656-7|AAF99964.2|  615|Caenorhabditis elegans Hypothetical
           protein F49F1.8 protein.
          Length = 615

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 256 IHTKVMGANPPLQPREQLAVHDAMASARQQLQATELSDAALAR 384
           + T ++G +PPL+   ++A       A +  Q  EL DAAL R
Sbjct: 215 LETFLIGLSPPLKRLVRIASPKTTEEAFELAQTIELVDAALLR 257


>AF067217-5|AAO38635.1|  856|Caenorhabditis elegans Hypothetical
           protein F56A6.1b protein.
          Length = 856

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +2

Query: 98  RGEAHLAAAVI--CPSDEXSKTFTINCASGDMLKLRATDXRARQEWVDGLXAIAG 256
           +G+ H  A V+  CP+   +    IN    DM+K+ A     R+   D +    G
Sbjct: 376 QGKIHFPAEVLLLCPNQTVTNDQMINNEQADMIKMSAAQPHIRKTTTDTIVRNVG 430


>AF067217-4|AAF99978.1|  887|Caenorhabditis elegans Hypothetical
           protein F56A6.1a protein.
          Length = 887

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +2

Query: 98  RGEAHLAAAVI--CPSDEXSKTFTINCASGDMLKLRATDXRARQEWVDGLXAIAG 256
           +G+ H  A V+  CP+   +    IN    DM+K+ A     R+   D +    G
Sbjct: 376 QGKIHFPAEVLLLCPNQTVTNDQMINNEQADMIKMSAAQPHIRKTTTDTIVRNVG 430


>AF000265-2|AAO38667.1|  887|Caenorhabditis elegans Paz/piwi
           domain-containing protein1, isoform c protein.
          Length = 887

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +2

Query: 98  RGEAHLAAAVI--CPSDEXSKTFTINCASGDMLKLRATDXRARQEWVDGLXAIAG 256
           +G+ H  A V+  CP+   +    IN    DM+K+ A     R+   D +    G
Sbjct: 376 QGKIHFPAEVLLLCPNQTVTNDQMINNEQADMIKMSAAQPHIRKTTTDTIVRNVG 430


>AF000265-1|AAB52946.2|  913|Caenorhabditis elegans Paz/piwi
           domain-containing protein1, isoform a protein.
          Length = 913

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
 Frame = +2

Query: 98  RGEAHLAAAVI--CPSDEXSKTFTINCASGDMLKLRATDXRARQEWVDGLXAIAG 256
           +G+ H  A V+  CP+   +    IN    DM+K+ A     R+   D +    G
Sbjct: 402 QGKIHFPAEVLLLCPNQTVTNDQMINNEQADMIKMSAAQPHIRKTTTDTIVRNVG 456


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,329,895
Number of Sequences: 27780
Number of extensions: 200476
Number of successful extensions: 570
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)