Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1467
(696 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_1036 + 9021395-9021658,9024214-9024690 44 2e-04
05_03_0604 - 16132173-16132391,16132488-16132556,16132824-161328... 43 3e-04
08_02_1304 - 26008105-26009070 36 0.023
08_02_1251 - 25592537-25593380,25593589-25593893 34 0.094
06_01_1008 - 7853089-7854147 34 0.094
10_08_0059 + 14529885-14530991 34 0.12
08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546 34 0.12
08_02_1310 - 26037025-26038074 33 0.16
08_01_0027 - 195321-195932,197206-197415 33 0.22
07_03_1529 + 27491963-27492465,27493045-27493154,27493384-274935... 33 0.22
07_01_0011 - 81696-81892,83345-83621,83841-84189,84280-84644 33 0.29
08_01_0797 + 7711772-7712869 32 0.38
10_08_0082 + 14713989-14714046,14714109-14714953 32 0.50
06_03_1063 - 27297755-27298748,27298791-27298834 32 0.50
08_01_0199 + 1628158-1629192 31 1.2
10_08_0119 - 14952786-14953931,14954709-14954831 30 1.5
08_01_0801 - 7750548-7751708 30 1.5
02_02_0160 + 7309520-7310092 30 1.5
10_08_0129 - 15025076-15025858,15025951-15026283 29 2.7
10_08_0122 - 14982676-14983043,14983957-14985145 29 2.7
04_04_1223 + 31851545-31852609,31854314-31854773,31856201-318562... 29 2.7
10_08_0073 + 14657400-14657696,14658168-14658229,14658241-14658886 29 3.5
08_01_0799 + 7734031-7735102,7735453-7735475 29 3.5
04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072 29 3.5
10_08_0130 - 15032348-15033338,15033459-15033517 28 6.2
03_05_0327 - 23154014-23154942,23155169-23155316,23155606-231566... 28 6.2
08_02_1305 - 26013022-26014107 28 8.1
08_02_1121 + 24457413-24457528,24458395-24458552,24458927-244590... 28 8.1
08_01_0992 + 10045182-10045917,10046225-10046685 28 8.1
>07_01_1036 + 9021395-9021658,9024214-9024690
Length = 246
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 249 IAAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQXEL 422
+ AH+++L+ SP F+ M + M ++ I+ + DVS+ LR + +MY E + +
Sbjct: 81 VPAHRVILASRSPVFRAMLENEMEESRSGIIKIYDVSYDVLRAFVHYMYTAEALLDEQMA 140
Query: 423 ASFISTAEQLQVKGL 467
+ + AE+ +VK L
Sbjct: 141 SDLLVLAEKYEVKNL 155
>05_03_0604 -
16132173-16132391,16132488-16132556,16132824-16132898,
16132981-16133113,16133188-16133297,16133360-16133407,
16133657-16133983,16135006-16135233,16135360-16135689,
16135780-16136586
Length = 781
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +3
Query: 246 VIAAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQXE 419
V AHKL+LS+ S F +MF M + VF +DV A L+QFMY GE+ V E
Sbjct: 362 VTHAHKLILSLWSMTFDKMFTNGMKESSASNVFFEDVPVEAFFLLIQFMYSGELKVDIEE 421
Query: 420 L 422
+
Sbjct: 422 I 422
>08_02_1304 - 26008105-26009070
Length = 321
Score = 36.3 bits (80), Expect = 0.023
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 255 AHKLVLSVCSPYFQE--MFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQXELAS 428
AH+ VL+ SP F+ + M P V L+D+ + R LL F+Y +V Q E +S
Sbjct: 167 AHRAVLAARSPVFRAELLGSMAEATMPCVTLRDIEPATFRALLHFVY---TDVLQIEGSS 223
Query: 429 FISTAEQLQ 455
ST + LQ
Sbjct: 224 STSTTDLLQ 232
>08_02_1251 - 25592537-25593380,25593589-25593893
Length = 382
Score = 34.3 bits (75), Expect = 0.094
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 255 AHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALRDLLQFMYQGE 398
AH+ +L+VCSP F+ + + + + L D+ + LL FMY G+
Sbjct: 237 AHRALLAVCSPVFKALLLSSTAEAAACSITLNDIKPAMFEALLHFMYTGD 286
>06_01_1008 - 7853089-7854147
Length = 352
Score = 34.3 bits (75), Expect = 0.094
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 255 AHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQG 395
AHK++L+ SP F F M + V +KD+ S + +L F+Y G
Sbjct: 190 AHKIILAARSPVFMAEFFGPMKESSSQCVEIKDIEASVFKAMLHFIYTG 238
>10_08_0059 + 14529885-14530991
Length = 368
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +3
Query: 216 RRRNVGCRRQVIAAHKLVLSVCSPYFQ-EMFKMNPTQH---PIVFLKDVSHSALRDLLQF 383
R R G + +AAH++VL+ SP F+ E+ P + ++ + D+ R LL +
Sbjct: 201 RVRGAGGEEETVAAHRVVLAARSPVFKAELLAGVPAKDGGGAVIQIDDMDAEVFRSLLHY 260
Query: 384 MY 389
MY
Sbjct: 261 MY 262
>08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546
Length = 290
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +3
Query: 252 AAHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 407
AAHK+VL++ SP F+ E+F M ++ +KD+ + LL F+Y +++
Sbjct: 131 AAHKVVLAMRSPVFKAELFGPMREAGAQVLPIKDIQPDVFKALLHFIYTDSLSI 184
>08_02_1310 - 26037025-26038074
Length = 349
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 243 QVIAAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQX 416
+ AH+ VL+ SP F+ M P V L+D+ +A R +L F+Y +
Sbjct: 188 ETFRAHRAVLAARSPVFKAALFGSMAEATAPSVALRDMDPAAFRAVLHFIYTDALPDDID 247
Query: 417 ELASF 431
ELA F
Sbjct: 248 ELAGF 252
>08_01_0027 - 195321-195932,197206-197415
Length = 273
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 246 VIAAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQ 413
V+ AHK +L+ CSP F+ MF + + + + D+ + L+ F+Y G + + Q
Sbjct: 118 VLKAHKAILASCSPVFESMFLHDLKEKESSTININDMCLESCSALIGFIY-GTIKLDQ 174
>07_03_1529 +
27491963-27492465,27493045-27493154,27493384-27493510,
27494082-27494430,27494975-27495251,27496236-27496333,
27498090-27498214,27498270-27498326,27498328-27498370,
27498581-27498667,27498802-27498882,27499735-27499901,
27499987-27500098,27500188-27500390,27500473-27500607,
27501106-27501205
Length = 857
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +3
Query: 243 QVIAAHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEV 401
+V AHK+VL+ SP F+ ++F M + ++D+ S + LL FMY E+
Sbjct: 320 EVFPAHKVVLAARSPVFRAQLFGPMKDKNMKRITIEDMEASVFKALLHFMYWDEL 374
>07_01_0011 - 81696-81892,83345-83621,83841-84189,84280-84644
Length = 395
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 249 IAAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQXE 419
+ AHK +L+ SP F+ F NP H ++ ++DV + ++ F+Y E+ E
Sbjct: 197 VQAHKWILAARSPVFKAQFFGPIGNPDLHTVI-VEDVEPLVFKAMVNFIYSDEL-PSIHE 254
Query: 420 LASFIST 440
LA +ST
Sbjct: 255 LAGSVST 261
>08_01_0797 + 7711772-7712869
Length = 365
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 252 AAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMY 389
AAHKLVL+ SP F+ F +M + +KD+ S R LL F+Y
Sbjct: 204 AAHKLVLAARSPVFKAEFYGEMIERGTFSIDIKDMQPSVFRALLHFIY 251
>10_08_0082 + 14713989-14714046,14714109-14714953
Length = 300
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +3
Query: 243 QVIAAHKLVLSVCSPYFQE----MFKMNPTQHPIVFLKDVSHSALRDLLQFMY 389
Q +AAH+ VL+ SP F+ + K T V ++D+ + LL+FMY
Sbjct: 139 QTLAAHRCVLAARSPVFKAELYGLMKEGGTAAGAVHIEDIEPRVFKVLLRFMY 191
>06_03_1063 - 27297755-27298748,27298791-27298834
Length = 345
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 249 IAAHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFLKDVSHSALRDLLQFMY 389
+AAH+ VL+ SP F E+F M + +KD+ R LL F+Y
Sbjct: 181 VAAHRCVLAARSPVFMAELFGDMKEKDSQSIEIKDMEAEVFRTLLHFIY 229
>08_01_0199 + 1628158-1629192
Length = 344
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 237 RRQVIAAHKLVLSVCSPYFQEMFKMNPTQH--PIVFLKDVSHSALRDLLQFMY 389
R Q AAH++VL++ SP F + +H P + + D+ LL+F+Y
Sbjct: 206 RGQPFAAHRIVLAMRSPVFMASLYGSMREHRAPRIAVDDMEPEVFDALLRFVY 258
>10_08_0119 - 14952786-14953931,14954709-14954831
Length = 422
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 243 QVIAAHKLVLSVCSPYFQ-EMFK-MNPTQHPIVFLKDVSHSALRDLLQFMY 389
+ AAH+LVL+ SP F+ E+FK M ++ + ++ + LL F+Y
Sbjct: 258 ETFAAHRLVLAARSPVFKAELFKPMEEGTTDVIKIDNMDAQVFKALLVFIY 308
>08_01_0801 - 7750548-7751708
Length = 386
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +3
Query: 252 AAHKLVLSVCSPYFQ-EMFKM--NPTQHPIVFLKDVSHSALRDLLQFMYQGEVNV 407
+ HKLVL++ SP F+ E+ + P PI + D+ + R LLQF+Y + V
Sbjct: 213 SVHKLVLAMRSPVFKAELCGLLREPGTQPITIV-DMQPAVFRALLQFIYTDQFPV 266
>02_02_0160 + 7309520-7310092
Length = 190
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = +3
Query: 159 QFPRKYVSGLSWPAVAWRSRRRNVGCRRQVIAAHKLVLSVCSPYFQEMFKMNPTQHPIVF 338
+F ++V GL AVA +R++ G R +AAH + VC F HP +F
Sbjct: 92 RFSGRWVCGLCAEAVAEEARKKKGGEREAALAAH---MGVC-----RRFNGFGRTHPALF 143
Query: 339 LKDVSHSALRDL 374
D LR L
Sbjct: 144 QADAMRHILRKL 155
>10_08_0129 - 15025076-15025858,15025951-15026283
Length = 371
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +3
Query: 243 QVIAAHKLVLSVCSPYF-QEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMY 389
+ AAH+LVL+V SP F E F K + ++ + D+ + LL F+Y
Sbjct: 176 ETFAAHRLVLAVRSPVFVAEHFGPMKEGVNVNDVIEINDMDAQVFKALLNFIY 228
>10_08_0122 - 14982676-14983043,14983957-14985145
Length = 518
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +3
Query: 243 QVIAAHKLVLSVCSPYF-QEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMY 389
+ AAH+LVL+V SP F E F K + ++ + D+ + LL F+Y
Sbjct: 204 ETFAAHRLVLAVRSPVFVAEHFGPMKEGVNVNDVIEINDMDAQVFKALLNFIY 256
>04_04_1223 +
31851545-31852609,31854314-31854773,31856201-31856250,
31856333-31856463,31856569-31856665,31856759-31856950,
31857121-31857123
Length = 665
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 243 QVIAAHKLVLSVCSPYF--QEMFKMNPTQHPIVFLKDVSHSALRDLLQFMY 389
+V+ AH+ VL+ SP F + + M T P + + V +A LL+F+Y
Sbjct: 203 RVLRAHRCVLAARSPVFDAELLGPMMETTAPCIEIHGVEPAAFEALLRFVY 253
>10_08_0073 + 14657400-14657696,14658168-14658229,14658241-14658886
Length = 334
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 231 GCRRQVIAAHKLVLSVCSPYFQ-EMF--KMNPTQHPIVFLKDVSHSALRDLLQFMY 389
G + AAH+ VL+ SP F E+F + + +V + D+ + LL+FMY
Sbjct: 166 GVGGETFAAHRCVLAAQSPVFSAELFGPMKDSDRAGVVRIDDMEAQVFKALLRFMY 221
>08_01_0799 + 7734031-7735102,7735453-7735475
Length = 364
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +3
Query: 249 IAAHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFLKDVSHSALRDLLQFMY 389
IAAHK++L+ S F+ E++ +M + V ++D+ R LL F+Y
Sbjct: 202 IAAHKIILAARSSVFKAELYGQMKEKRARRVTVEDMQPDVFRGLLHFIY 250
>04_04_0804 + 28171110-28171176,28171829-28172317,28172384-28173072
Length = 414
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 279 CSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVN-VKQXEL 422
C P + F T++P+VFL+ + + DLLQ + V+ K+ EL
Sbjct: 253 CEPRKEIFFTERNTENPLVFLRFLVSTPWGDLLQIKFSRRVHRTKRLEL 301
>10_08_0130 - 15032348-15033338,15033459-15033517
Length = 349
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +3
Query: 243 QVIAAHKLVLSVCSPYFQ-EMF---KMNPTQHPIVFLKDVSHSALRDLLQFMY 389
+ AAH+LVL+ SP F E+F K + T + I D+ R LL+F+Y
Sbjct: 166 ETFAAHRLVLAARSPVFMVELFGPMKESTTVNKIQIF-DMEAQVFRVLLKFIY 217
>03_05_0327 -
23154014-23154942,23155169-23155316,23155606-23156622,
23156753-23157217,23160258-23161247
Length = 1182
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 231 GCRRQVIAAHKLVLSVCSPYFQEMFK 308
GC+ V+AAHKLV S S + EMF+
Sbjct: 662 GCQEAVLAAHKLVFS--SGWSDEMFE 685
>08_02_1305 - 26013022-26014107
Length = 361
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +3
Query: 228 VGCRRQVIAAHKLVLSVCSPYFQ-EMF--KMNPT--QHPIVFLKDVSHSALRDLLQFMYQ 392
VG + AAH+ VL+ SP F+ E+F K T + L+ + + R LL+F+Y
Sbjct: 190 VGGGGERFAAHRAVLAARSPVFRTELFGCKSESTSPSSSCITLQGIEPAIFRALLRFIYT 249
Query: 393 GEV 401
E+
Sbjct: 250 DEL 252
>08_02_1121 +
24457413-24457528,24458395-24458552,24458927-24459042,
24459735-24460400
Length = 351
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 249 IAAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMY 389
I AH+ +L+ SP F+ MF + + V + D+S A + L ++Y
Sbjct: 197 IMAHRAILASRSPVFRSMFSHDLKEKELSTVDISDMSLEACQAFLNYIY 245
>08_01_0992 + 10045182-10045917,10046225-10046685
Length = 398
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Frame = +3
Query: 195 PAVAWRSRRR-NVGCRRQVIAAHKLV 269
PA W+S RR N+G R++ AAH+++
Sbjct: 216 PASWWKSMRRLNIGPERRLAAAHRVL 241
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,368,803
Number of Sequences: 37544
Number of extensions: 302620
Number of successful extensions: 723
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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