Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1463
         (528 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC003385-1|AAH03385.1|  374|Homo sapiens speckle-type POZ protei...    68   2e-11
BC001269-1|AAH01269.1|  374|Homo sapiens speckle-type POZ protei...    68   2e-11
AK222589-1|BAD96309.1|  374|Homo sapiens speckle-type POZ protei...    68   2e-11
AJ000644-1|CAA04199.1|  374|Homo sapiens SPOP protein.                 68   2e-11
BC071613-1|AAH71613.1|  392|Homo sapiens hypothetical protein LO...    66   1e-10
AK021919-1|BAB13937.1|  391|Homo sapiens protein ( Homo sapiens ...    66   1e-10
BX537402-1|CAD97644.1|  824|Homo sapiens hypothetical protein pr...    30   5.8  

>BC003385-1|AAH03385.1|  374|Homo sapiens speckle-type POZ protein
           protein.
          Length = 374

 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 31/47 (65%), Positives = 37/47 (78%), Gaps = 3/47 (6%)
 Frame = +3

Query: 354 VSRVPSP---LHDGNTPVAENWCFTQVKVVKFSYMWTINNFSFFVEK 485
           +SRVPSP       + PVAE+WC+TQ+KVVKFSYMWTINNFSF  E+
Sbjct: 1   MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREE 47


>BC001269-1|AAH01269.1|  374|Homo sapiens speckle-type POZ protein
           protein.
          Length = 374

 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 31/47 (65%), Positives = 37/47 (78%), Gaps = 3/47 (6%)
 Frame = +3

Query: 354 VSRVPSP---LHDGNTPVAENWCFTQVKVVKFSYMWTINNFSFFVEK 485
           +SRVPSP       + PVAE+WC+TQ+KVVKFSYMWTINNFSF  E+
Sbjct: 1   MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREE 47


>AK222589-1|BAD96309.1|  374|Homo sapiens speckle-type POZ protein
           variant protein.
          Length = 374

 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 31/47 (65%), Positives = 37/47 (78%), Gaps = 3/47 (6%)
 Frame = +3

Query: 354 VSRVPSP---LHDGNTPVAENWCFTQVKVVKFSYMWTINNFSFFVEK 485
           +SRVPSP       + PVAE+WC+TQ+KVVKFSYMWTINNFSF  E+
Sbjct: 1   MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREE 47


>AJ000644-1|CAA04199.1|  374|Homo sapiens SPOP protein.
          Length = 374

 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 31/47 (65%), Positives = 37/47 (78%), Gaps = 3/47 (6%)
 Frame = +3

Query: 354 VSRVPSP---LHDGNTPVAENWCFTQVKVVKFSYMWTINNFSFFVEK 485
           +SRVPSP       + PVAE+WC+TQ+KVVKFSYMWTINNFSF  E+
Sbjct: 1   MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREE 47


>BC071613-1|AAH71613.1|  392|Homo sapiens hypothetical protein
           LOC339745 protein.
          Length = 392

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/47 (63%), Positives = 37/47 (78%), Gaps = 3/47 (6%)
 Frame = +3

Query: 354 VSRVPSPLHDGNT---PVAENWCFTQVKVVKFSYMWTINNFSFFVEK 485
           +SR P+P   G+    P+AE+WC+TQVKVVKFSYMWTINNFSF  E+
Sbjct: 1   MSREPTPPLPGDMSTGPIAESWCYTQVKVVKFSYMWTINNFSFCREE 47



 Score = 29.5 bits (63), Expect = 7.6
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 473 FCREEMGEVLKS 508
           FCREEMGEVLKS
Sbjct: 43  FCREEMGEVLKS 54


>AK021919-1|BAB13937.1|  391|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11857 fis, clone HEMBA1006807, moderately
           similar to Homo sapiens mRNA for SPOP. ).
          Length = 391

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 30/47 (63%), Positives = 37/47 (78%), Gaps = 3/47 (6%)
 Frame = +3

Query: 354 VSRVPSPLHDGNT---PVAENWCFTQVKVVKFSYMWTINNFSFFVEK 485
           +SR P+P   G+    P+AE+WC+TQVKVVKFSYMWTINNFSF  E+
Sbjct: 1   MSREPTPPLPGDMSTGPIAESWCYTQVKVVKFSYMWTINNFSFCREE 47



 Score = 29.5 bits (63), Expect = 7.6
 Identities = 12/12 (100%), Positives = 12/12 (100%)
 Frame = +2

Query: 473 FCREEMGEVLKS 508
           FCREEMGEVLKS
Sbjct: 43  FCREEMGEVLKS 54


>BX537402-1|CAD97644.1|  824|Homo sapiens hypothetical protein
           protein.
          Length = 824

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 335 RRWRHGGEPRAQPVARRKHARRRKLVLHTSQ 427
           RRWR  G+ R QP  R    +R  + LH+ Q
Sbjct: 3   RRWRRRGKQREQPEDRGVPMKRAAMALHSPQ 33


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,649,251
Number of Sequences: 237096
Number of extensions: 1054084
Number of successful extensions: 2168
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2162
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)