Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1463
         (528 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30662-10|CAI58651.1|  409|Caenorhabditis elegans Hypothetical p...    71   5e-13
Z30662-9|CAA83138.2|  451|Caenorhabditis elegans Hypothetical pr...    71   5e-13
AF040647-7|AAB94996.2|  506|Caenorhabditis elegans Amino acid tr...    30   1.2  
Z81586-9|CAB04699.2|  676|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U41106-2|AAA82410.1|  797|Caenorhabditis elegans Hypothetical pr...    28   3.6  
AC024817-43|AAK93865.2|  151|Caenorhabditis elegans Ubiquitin co...    28   3.6  
Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z48717-7|CAA88605.1|  518|Caenorhabditis elegans Hypothetical pr...    27   8.3  
U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.       27   8.3  
U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical pr...    27   8.3  
U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical pr...    27   8.3  

>Z30662-10|CAI58651.1|  409|Caenorhabditis elegans Hypothetical
           protein T16H12.5b protein.
          Length = 409

 Score = 70.9 bits (166), Expect = 5e-13
 Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
 Frame = +3

Query: 327 SSNGAGGMAVSRVPSPLHDGNT--PVAENWCFTQVKVVKFSYMWTINNFSFFVEK 485
           S N A G ++S  PS    G+   PVAENWC TQVKVVKF+YMWTINNFSF  E+
Sbjct: 15  SGNSAHGRSISPSPSSASHGDPLLPVAENWCHTQVKVVKFNYMWTINNFSFCREE 69



 Score = 29.9 bits (64), Expect = 1.2
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = +2

Query: 473 FCREEMGEVLKSRLSQLG 526
           FCREEMGEVLKS     G
Sbjct: 65  FCREEMGEVLKSSTFSAG 82


>Z30662-9|CAA83138.2|  451|Caenorhabditis elegans Hypothetical
           protein T16H12.5a protein.
          Length = 451

 Score = 70.9 bits (166), Expect = 5e-13
 Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
 Frame = +3

Query: 327 SSNGAGGMAVSRVPSPLHDGNT--PVAENWCFTQVKVVKFSYMWTINNFSFFVEK 485
           S N A G ++S  PS    G+   PVAENWC TQVKVVKF+YMWTINNFSF  E+
Sbjct: 57  SGNSAHGRSISPSPSSASHGDPLLPVAENWCHTQVKVVKFNYMWTINNFSFCREE 111



 Score = 29.9 bits (64), Expect = 1.2
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = +2

Query: 473 FCREEMGEVLKSRLSQLG 526
           FCREEMGEVLKS     G
Sbjct: 107 FCREEMGEVLKSSTFSAG 124


>AF040647-7|AAB94996.2|  506|Caenorhabditis elegans Amino acid
           transporter protein 7 protein.
          Length = 506

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 396 VAENWCFTQVKVVKFSYMWTINNFSFFVEKK 488
           + ENW F   ++V FS +W +   +FF  KK
Sbjct: 130 IDENWRFMTYRLVGFSMLWPLMLLNFFSLKK 160


>Z81586-9|CAB04699.2|  676|Caenorhabditis elegans Hypothetical
           protein T05F1.11 protein.
          Length = 676

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 329 FERRWRHGGEPRAQPVARRKHARRRK 406
           +ERRWR   E R + + R+K   R+K
Sbjct: 421 YERRWRIEEEERLEEIRRKKEEERKK 446


>U41106-2|AAA82410.1|  797|Caenorhabditis elegans Hypothetical
           protein W06A11.2 protein.
          Length = 797

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 491 PFLLYKKTKIVYCPHVTEFHHFDLCEAPVF 402
           PFL + + + V+CP    FH   +   PVF
Sbjct: 42  PFLSFLRERDVFCPVFERFHGNGMSRCPVF 71


>AC024817-43|AAK93865.2|  151|Caenorhabditis elegans Ubiquitin
           conjugating enzyme protein13 protein.
          Length = 151

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 351 AVSRVPSPLHDGNTPVAENWCFTQVKVVKFSYMWTIN 461
           A+   P+P     T VAE W   + + +K +  WT+N
Sbjct: 111 ALLSAPNPEDPLATDVAEQWKTNEAEAIKTAKQWTMN 147


>Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical
           protein ZK858.4 protein.
          Length = 395

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 417 TQVKVVKFSYMWTINNFS 470
           T++KV K  + WT+ NFS
Sbjct: 35  TEIKVEKVQHTWTVKNFS 52


>Z48717-7|CAA88605.1|  518|Caenorhabditis elegans Hypothetical
           protein T10B9.3 protein.
          Length = 518

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 412 HQFSATGVFPSCNGLGTRLTAMPPAPF 332
           H F  TG+FP   G+  +++ M PA F
Sbjct: 211 HVFLITGIFPPLAGVFRKMSKMLPASF 237


>U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.
          Length = 395

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 417 TQVKVVKFSYMWTINNFS 470
           T++KV K  + WT+ NFS
Sbjct: 35  TEIKVEKVQHTWTVKNFS 52


>U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical
           protein C07D10.2a protein.
          Length = 390

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 399 AENWCFTQVKVVKFSYMWTINNFS 470
           A++W  ++V+ +   +MWTI  FS
Sbjct: 12  ADSWSTSEVRSLVHKHMWTIRGFS 35


>U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical
           protein C07D10.2b protein.
          Length = 397

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 399 AENWCFTQVKVVKFSYMWTINNFS 470
           A++W  ++V+ +   +MWTI  FS
Sbjct: 12  ADSWSTSEVRSLVHKHMWTIRGFS 35


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,947,643
Number of Sequences: 27780
Number of extensions: 166569
Number of successful extensions: 411
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)