Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1455
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118519-1|AAM49888.1|  104|Drosophila melanogaster LD16736p pro...    29   3.6  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   6.3  
DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr...    28   8.4  
DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p...    28   8.4  
AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB...    28   8.4  

>AY118519-1|AAM49888.1|  104|Drosophila melanogaster LD16736p
           protein.
          Length = 104

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 20/54 (37%), Positives = 23/54 (42%)
 Frame = -3

Query: 191 SNXSCKLHLXQVKLHKRDNKHTFQRVWRDAQCS*GKQVVXVCMDFFHSSLYHIP 30
           S  SC LH       K D+ HT    +R A C  G+Q V    D  HS    IP
Sbjct: 19  SGKSCLLHHFIESKFKDDSSHTIGVEFRLADCERGRQ-VGKATDMGHSRSGEIP 71


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/61 (26%), Positives = 24/61 (39%)
 Frame = +2

Query: 59    NPCIQXPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKXYSKELGETPSAVCKEPLK 238
             +PC+  P  C  N+E R   A + A C      +G    C+       E P  +    L+
Sbjct: 10490 DPCVPSP--CGPNSECRVSAANEQAVCSCLQHYVGRAPNCRPECTSDSECPGNLACINLR 10547

Query: 239   C 241
             C
Sbjct: 10548 C 10548



 Score = 28.7 bits (61), Expect = 6.3
 Identities = 21/66 (31%), Positives = 27/66 (40%)
 Frame = +2

Query: 44    DYCEKNPCIQXPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKXYSKELGETPSAVC 223
             D   ++PC   P  C  N+E RA  AG+ A C      +G    CK       E PS + 
Sbjct: 15295 DIVPQDPCRPSP--CGPNSECRA--AGETATCTCLGDFVGSPPYCKPECVANSECPSNLA 15350

Query: 224   KEPLKC 241
                 KC
Sbjct: 15351 CINQKC 15356


>DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut
           protein.
          Length = 2176

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
 Frame = +2

Query: 83  VCPKNTEHRARHAGKCACCP----ACVTLLG-EGATCKXYSKELGETPSAVCKEPLKCIK 247
           VC   T  R +H G+C   P     C    G  G  C+   +E+ E  S+ C+    C+ 
Sbjct: 261 VCETGTGARCQHGGECIEGPGLEFTCDCPAGWHGRICQ---EEINECASSPCQNGGVCVD 317

Query: 248 RVSLSLCSRP 277
           +++   C+ P
Sbjct: 318 KLAAYACACP 327


>DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker
           protein.
          Length = 2165

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
 Frame = +2

Query: 83  VCPKNTEHRARHAGKCACCP----ACVTLLG-EGATCKXYSKELGETPSAVCKEPLKCIK 247
           VC   T  R +H G+C   P     C    G  G  C+   +E+ E  S+ C+    C+ 
Sbjct: 250 VCETGTGARCQHGGECIEGPGLEFTCDCPAGWHGRICQ---EEINECASSPCQNGGVCVD 306

Query: 248 RVSLSLCSRP 277
           +++   C+ P
Sbjct: 307 KLAAYACACP 316


>AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB
           protein.
          Length = 1984

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
 Frame = +2

Query: 83  VCPKNTEHRARHAGKCACCP----ACVTLLG-EGATCKXYSKELGETPSAVCKEPLKCIK 247
           VC   T  R +H G+C   P     C    G  G  C+   +E+ E  S+ C+    C+ 
Sbjct: 54  VCETGTGARCQHGGECIEGPGLEFTCDCPAGWHGRICQ---EEINECASSPCQNGGVCVD 110

Query: 248 RVSLSLCSRP 277
           +++   C+ P
Sbjct: 111 KLAAYACACP 120


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,726,207
Number of Sequences: 53049
Number of extensions: 403391
Number of successful extensions: 793
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)