Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1443
(578 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68296-6|CAE17754.1| 195|Caenorhabditis elegans Hypothetical pr... 32 0.26
U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z95559-9|CAI46625.1| 510|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z35604-6|CAA84681.1| 305|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF125964-6|AAD14755.2| 589|Caenorhabditis elegans Acid sphingom... 29 1.8
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 29 2.4
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 29 2.4
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 29 2.4
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 27 7.3
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 27 7.3
Z82278-8|CAB05251.2| 312|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 27 9.6
>Z68296-6|CAE17754.1| 195|Caenorhabditis elegans Hypothetical
protein C46C2.6a protein.
Length = 195
Score = 32.3 bits (70), Expect = 0.26
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 86 CPKNTEHRARHAGKCACCPACVTLLGEGATC-KIYSKELGETPSAVCK-EPLKC 241
CP + + +H+G+CA AC+ G C K++S ++ T CK +P+ C
Sbjct: 60 CPSDYDFIRQHSGRCADGTACIPDSSFGEPCIKLFSYQM--TKKFCCKSDPIDC 111
>U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical
protein T10E10.4 protein.
Length = 966
Score = 30.7 bits (66), Expect = 0.78
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +2
Query: 38 GTDYCEKNPCIQPPLVCPKNTEHRARHAGKCA-CCPACVTLLGEGATCKIYSKELGETPS 214
G D C C P CP N R +G C CCP T + G C + S G
Sbjct: 530 GVD-CNNGACCPLP-TCPNNIASSQRCSGGCTNCCPVGQTCM-NGGCCDLPSCPSGGFAI 586
Query: 215 AVC 223
++C
Sbjct: 587 SMC 589
>Z95559-9|CAI46625.1| 510|Caenorhabditis elegans Hypothetical
protein Y41E3.18 protein.
Length = 510
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 92 KNTEHRARHAGKCACCPACVTLLGEGA 172
K T HR +H ACCP C ++ A
Sbjct: 147 KGTWHRVKHVVFVACCPPCCCIIQRSA 173
>Z35604-6|CAA84681.1| 305|Caenorhabditis elegans Hypothetical
protein ZK1058.6 protein.
Length = 305
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 146 CVTLLGEGATCKIYSKELGETPSAVCKEPLKCIKRVSL 259
CV G+G+T ++S +G+ SA+C E + R++L
Sbjct: 137 CVWGQGDGSTMPVFSTSVGKIGSAICWENYMPLYRMTL 174
>AF125964-6|AAD14755.2| 589|Caenorhabditis elegans Acid
sphingomyelinase protein 3 protein.
Length = 589
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +2
Query: 224 KEPLKCIKRVSLSLCSRFH*QENISLQYFYHDLFEI*FVYGIKLIII 364
K+ +C+ +++ +C FH ++N + D F F+Y IK I++
Sbjct: 38 KKTEECVMEIAVFICETFHIEDNDVCNFIISD-FSDEFMYVIKQILV 83
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform a protein.
Length = 2560
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +2
Query: 38 GTDYCEKNPCIQPPLVCPKNTEHRARHA-GKCACCPACVTLLGEGATCKIYSKELGETPS 214
GT +++P + LVC N R GKC C P + A C + G
Sbjct: 302 GTSGAKEHP-LASVLVCESNCNQRGECVHGKCHCAPGFTGRTCDEAVCPVVCSGNGVFSG 360
Query: 215 AVC 223
+C
Sbjct: 361 GIC 363
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +2
Query: 38 GTDYCEKNPCIQPPLVCPKNTEHRARHA-GKCACCPACVTLLGEGATCKIYSKELGETPS 214
GT +++P + LVC N R GKC C P + A C + G
Sbjct: 244 GTSGAKEHP-LASVLVCESNCNQRGECVHGKCHCAPGFTGRTCDEAVCPVVCSGNGVFSG 302
Query: 215 AVC 223
+C
Sbjct: 303 GIC 305
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +2
Query: 38 GTDYCEKNPCIQPPLVCPKNTEHRARHA-GKCACCPACVTLLGEGATCKIYSKELGETPS 214
GT +++P + LVC N R GKC C P + A C + G
Sbjct: 426 GTSGAKEHP-LASVLVCESNCNQRGECVHGKCHCAPGFTGRTCDEAVCPVVCSGNGVFSG 484
Query: 215 AVC 223
+C
Sbjct: 485 GIC 487
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.5 bits (58), Expect = 7.3
Identities = 23/81 (28%), Positives = 32/81 (39%)
Frame = +2
Query: 32 VCGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKELGETP 211
+CGT C+K+ C P + +C CC C+ +GE TC + P
Sbjct: 26 LCGT--CDKDSC-------PDVSGCEQLKKDQCDCCEVCIRQIGE--TC--------DGP 66
Query: 212 SAVCKEPLKCIKRVSLSLCSR 274
VC L C + L SR
Sbjct: 67 GLVCDSHLSCHQENDLDGSSR 87
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.5 bits (58), Expect = 7.3
Identities = 23/81 (28%), Positives = 32/81 (39%)
Frame = +2
Query: 32 VCGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCKIYSKELGETP 211
+CGT C+K+ C P + +C CC C+ +GE TC + P
Sbjct: 26 LCGT--CDKDSC-------PDVSGCEQLKKDQCDCCEVCIRQIGE--TC--------DGP 66
Query: 212 SAVCKEPLKCIKRVSLSLCSR 274
VC L C + L SR
Sbjct: 67 GLVCDSHLSCHQENDLDGSSR 87
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 27.5 bits (58), Expect = 7.3
Identities = 25/98 (25%), Positives = 34/98 (34%), Gaps = 9/98 (9%)
Frame = +2
Query: 2 CXASAAYGALVCGT--DYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGA- 172
C + + CG C + PC++P C + H+ C C + G
Sbjct: 621 CGHTVRMPPIPCGARLPVCSQ-PCVRPHS-CDHSVSHKCHGEQNCPPCTQLTEKMCYGGH 678
Query: 173 ------TCKIYSKELGETPSAVCKEPLKCIKRVSLSLC 268
C I S G VCK+PLKC V C
Sbjct: 679 RVRKNIPCHIDSVSCG----VVCKKPLKCGVHVCQRTC 712
>Z82278-8|CAB05251.2| 312|Caenorhabditis elegans Hypothetical
protein M162.8 protein.
Length = 312
Score = 27.1 bits (57), Expect = 9.6
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = +1
Query: 310 LSRPVRNIIC--VRNKIDNNMHCSKYRNLKLKNMNF**TEQKRNEIVCIIQVT-LSGYRD 480
++R V +C +RN +DN C K+ L + N ++ +E C + T L GY
Sbjct: 38 INRLVLRKVCRKLRNFLDNRDPCFKHVELSIYNNSY--WIHLHSECWCSTRNTGLGGYCT 95
Query: 481 NVCNSSSIIIYSHKSL-IIVQILED 552
N + ++ S SL I+++LED
Sbjct: 96 NNFKNPVLMRISRNSLNEILRVLED 120
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +2
Query: 2 CXASAAYGALVCGTDYCEKNPCI 70
C +A +G C CE NPC+
Sbjct: 623 CFCAAGFGGPKCDQRPCESNPCL 645
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,555,852
Number of Sequences: 27780
Number of extensions: 285962
Number of successful extensions: 686
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 686
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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