Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1435
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50177-5|CAE46663.1| 289|Caenorhabditis elegans Hypothetical pr... 81 9e-16
Z50177-4|CAA90546.1| 287|Caenorhabditis elegans Hypothetical pr... 81 9e-16
Z50177-6|CAA90547.1| 287|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z70310-7|CAA94364.1| 607|Caenorhabditis elegans Hypothetical pr... 56 3e-08
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 50 1e-06
AY669392-1|AAU05397.1| 158|Caenorhabditis elegans truncated aro... 29 2.8
AY669391-1|AAU05396.1| 158|Caenorhabditis elegans truncated aro... 29 2.8
AC006777-7|AAK72306.2| 367|Caenorhabditis elegans Seven tm rece... 29 2.8
Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical pr... 28 5.0
>Z50177-5|CAE46663.1| 289|Caenorhabditis elegans Hypothetical
protein F46G10.7b protein.
Length = 289
Score = 80.6 bits (190), Expect = 9e-16
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = +1
Query: 100 GIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
GIPDYRS+DVGLYAR HKPI +Q++++ + RQRYW+RN++ WPRF P
Sbjct: 45 GIPDYRSKDVGLYARIAHKPIYFQDYMRSNRCRQRYWSRNFLAWPRFGQAAP 96
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 249 ATNVTHLCIRELEKKGKVTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRH 428
A N+ H + + E + ++TQNVD LH KAGS+ V ELHG++ V+C C Y R
Sbjct: 95 APNINHYALSKWEASDRFQWLITQNVDGLHLKAGSKMVTELHGSALQVKCTTCDYIESRQ 154
Query: 429 ELQEILTENNPDMESSF---SMIRPDGDVDCRGNK*KNSELHSAQSVKGL*NQI*CFLVD 599
Q+ L NP + + PDGD+ K ++ S GL F +
Sbjct: 155 TYQDRLDYANPGFKEEHVAPGELAPDGDIILPLGTEKGFQIPECPSCGGLMKTDVTFFGE 214
Query: 600 NV 605
NV
Sbjct: 215 NV 216
>Z50177-4|CAA90546.1| 287|Caenorhabditis elegans Hypothetical
protein F46G10.7a protein.
Length = 287
Score = 80.6 bits (190), Expect = 9e-16
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = +1
Query: 100 GIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
GIPDYRS+DVGLYAR HKPI +Q++++ + RQRYW+RN++ WPRF P
Sbjct: 43 GIPDYRSKDVGLYARIAHKPIYFQDYMRSNRCRQRYWSRNFLAWPRFGQAAP 94
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Frame = +3
Query: 249 ATNVTHLCIRELEKKGKVTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRH 428
A N+ H + + E + ++TQNVD LH KAGS+ V ELHG++ V+C C Y R
Sbjct: 93 APNINHYALSKWEASDRFQWLITQNVDGLHLKAGSKMVTELHGSALQVKCTTCDYIESRQ 152
Query: 429 ELQEILTENNPDMESSF---SMIRPDGDVDCRGNK*KNSELHSAQSVKGL*NQI*CFLVD 599
Q+ L NP + + PDGD+ K ++ S GL F +
Sbjct: 153 TYQDRLDYANPGFKEEHVAPGELAPDGDIILPLGTEKGFQIPECPSCGGLMKTDVTFFGE 212
Query: 600 NV 605
NV
Sbjct: 213 NV 214
>Z50177-6|CAA90547.1| 287|Caenorhabditis elegans Hypothetical
protein F46G10.3 protein.
Length = 287
Score = 76.6 bits (180), Expect = 1e-14
Identities = 30/52 (57%), Positives = 41/52 (78%)
Frame = +1
Query: 100 GIPDYRSEDVGLYARSNHKPIQYQEFVKYPKVRQRYWARNYIGWPRFSCVQP 255
GIPDYRS+DVGLY ++ +PI +Q+F+K K RQRYW+R+Y+ WPRF+ P
Sbjct: 43 GIPDYRSKDVGLYTKTALEPIYFQDFMKSKKCRQRYWSRSYLNWPRFAQALP 94
Score = 60.9 bits (141), Expect = 8e-10
Identities = 29/75 (38%), Positives = 39/75 (52%)
Frame = +3
Query: 255 NVTHLCIRELEKKGKVTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHEL 434
N H + + E K ++TQNVD LH KAGS+ + ELHG + V+C C Y R
Sbjct: 95 NFNHYALSKWEAANKFHWLITQNVDGLHLKAGSKMITELHGNALQVKCTSCEYIETRQTY 154
Query: 435 QEILTENNPDMESSF 479
Q+ L NP + F
Sbjct: 155 QDRLNYANPGFKEQF 169
>Z70310-7|CAA94364.1| 607|Caenorhabditis elegans Hypothetical
protein R11A8.4 protein.
Length = 607
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = +3
Query: 255 NVTHLCIRELEKKGKVTSIVTQNVDRLHHKAGSEKVIELHGTSYLVQCLKCPYEIDRHEL 434
+V+H I+ELE G++ TQN+D L H+ G ++V+E HG+ C +C + D +E+
Sbjct: 216 SVSHRFIKELETSGRLLRNYTQNIDTLEHQTGIKRVVECHGSFSKCTCTRCGQKYDGNEI 275
Query: 435 QE 440
+E
Sbjct: 276 RE 277
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 515 REQVEKFRAPLCPKCEGPLKPDIVFFG 595
RE+V R C +CEG +KP+IVFFG
Sbjct: 276 REEVLAMRVAHCKRCEGVIKPNIVFFG 302
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 94 SLGIPDYRSEDVGLYAR 144
S GIPD+RS+D G+YAR
Sbjct: 159 SCGIPDFRSKD-GIYAR 174
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +3
Query: 234 EIQLCATNVTHLCIRELEKKGKVTSIVTQNVDRLHHKAG--SEKVIELHGTSYLVQCLKC 407
+ Q+ V+H I L K G + +I+TQNVD L K G E +IE+HG +L C C
Sbjct: 95 DFQVARPGVSHKSILALHKAGYIKTIITQNVDGLDRKVGIPVEDLIEVHGNLFLEVCQSC 154
Query: 408 PYEIDRHEL 434
E R E+
Sbjct: 155 FSEYVREEI 163
>AY669392-1|AAU05397.1| 158|Caenorhabditis elegans truncated
aromatic L-amino aciddecarboxylase protein.
Length = 158
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/51 (43%), Positives = 25/51 (49%)
Frame = -3
Query: 565 PFTLWAEWSSEFFYLFPRQSTSPSGLIMEKLLSISGLFSVNISWSSCLSIS 413
P T W FF FP S IM +LS SGL SV SW +C SI+
Sbjct: 67 PATHWNH--PHFFAYFPAGLAYHS--IMADILS-SGLSSVGFSWMACPSIT 112
>AY669391-1|AAU05396.1| 158|Caenorhabditis elegans truncated
aromatic L-amino aciddecarboxylase protein.
Length = 158
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/51 (43%), Positives = 25/51 (49%)
Frame = -3
Query: 565 PFTLWAEWSSEFFYLFPRQSTSPSGLIMEKLLSISGLFSVNISWSSCLSIS 413
P T W FF FP S IM +LS SGL SV SW +C SI+
Sbjct: 67 PATHWNH--PHFFAYFPAGLAYHS--IMADILS-SGLSSVGFSWMACPSIT 112
>AC006777-7|AAK72306.2| 367|Caenorhabditis elegans Seven tm
receptor protein 222 protein.
Length = 367
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -3
Query: 625 CSTRYLGTLSTKKHYIWFQRPFTLWAEWSSEFFYLFPRQSTSPSGLIMEKLLSISGL 455
C ++ + +T K IWF P + A WS + Y F R + + I + + GL
Sbjct: 122 CGSQLANSFNTWKIVIWFLLPLSFGAIWSFD-GYFFCRPTEEVTNFIKDSVYVTFGL 177
>Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical
protein F19B6.4 protein.
Length = 695
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 604 TLSTKKHYIWFQRPFTLWAEWSSEFFYLFPRQS 506
TLS+ + PFT W+++FF++F R S
Sbjct: 390 TLSSSRREHPETAPFTFPRTWTAQFFFIFQRSS 422
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,210,634
Number of Sequences: 27780
Number of extensions: 369503
Number of successful extensions: 963
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -