Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1434
         (547 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0183 - 20999343-20999865,21000351-21000748                       29   2.4  
01_06_1093 + 34471262-34471334,34474526-34476759                       29   3.2  
12_02_0876 - 23926691-23928090,23928184-23928919,23929048-23929272     28   4.2  
11_06_0667 + 26071774-26072070,26072352-26073153,26073209-260734...    28   4.2  
10_02_0074 - 4965688-4966638,4966877-4966906,4968656-4968927,496...    27   7.4  
03_02_0097 + 5602912-5603293,5604599-5604676,5604935-5604963           27   9.8  
01_01_0779 - 6030245-6031780                                           27   9.8  

>11_06_0183 - 20999343-20999865,21000351-21000748
          Length = 306

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -2

Query: 213 PEYEGQDDNDSWLLHRQKFLEETEQK 136
           P+++G+DD  +WL H ++F   TE +
Sbjct: 94  PKFDGKDDPLNWLNHCEQFFFRTENR 119


>01_06_1093 + 34471262-34471334,34474526-34476759
          Length = 768

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +1

Query: 286 CTGRGTGSRGKNYACMQSRC 345
           C  RG GSR KN  C  S C
Sbjct: 744 CESRGVGSRAKNCLCGSSNC 763


>12_02_0876 - 23926691-23928090,23928184-23928919,23929048-23929272
          Length = 786

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 54  QIVPXEWPKLKKNLINITFEHYLPTSNPSAQ 146
           Q V   W K + N IN +  HYLP  NP  Q
Sbjct: 322 QNVSMGWFKQEPNGINFSAAHYLPRCNPFNQ 352


>11_06_0667 +
           26071774-26072070,26072352-26073153,26073209-26073411,
           26075078-26075521,26075703-26075758,26076323-26076402,
           26077098-26077174,26077279-26078301
          Length = 993

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 191 IMILGCCTGKSSWRKLSRRIRCWE 120
           I + GCCT +   RK+   I CW+
Sbjct: 208 IRLFGCCTERQYKRKIKLSIWCWK 231


>10_02_0074 -
           4965688-4966638,4966877-4966906,4968656-4968927,
           4969092-4969329
          Length = 496

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 252 EADLLVFEPPSLAPEYEGQDDNDSWLLHRQKFLEETEQKD 133
           E D++ F+P  L  +Y+G  +N  W     +   +T++KD
Sbjct: 67  EVDIMSFDPVKLIEKYKGYGEN-RWYFFTVRKPSKTKKKD 105


>03_02_0097 + 5602912-5603293,5604599-5604676,5604935-5604963
          Length = 162

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 314 PLEPVPRPVHDSIPSLTNESWKQT 243
           PLEP+P PVH   P  +++  ++T
Sbjct: 56  PLEPIPPPVHRRTPHHSDQCRRRT 79


>01_01_0779 - 6030245-6031780
          Length = 511

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 340 VTAYMRSSCLWNQFLGRYTIRYHP*QTKV 254
           +TA M S+  + Q + R  +RYHP  T V
Sbjct: 360 ITAEMMSAMKYTQAVAREVVRYHPPATLV 388


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,264,491
Number of Sequences: 37544
Number of extensions: 234629
Number of successful extensions: 710
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)