Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1430
(568 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0843 + 28126480-28127007,28127092-28127457,28129388-281294... 32 9e-04
02_05_0512 + 29675835-29675901,29676681-29676813,29677020-296771... 33 0.21
06_03_0226 - 18420293-18420697 32 0.28
12_02_0528 + 20059613-20061472 31 0.48
11_06_0499 + 24354810-24355212,24355677-24355735,24355846-243559... 31 0.48
12_02_0230 + 15973390-15974645,16002878-16003097 31 0.85
05_05_0060 - 22015440-22015481,22015572-22015709,22016704-220167... 30 1.1
03_02_0982 + 12925861-12926211,12926309-12926378,12927190-129272... 30 1.5
07_01_0323 - 2264356-2264650,2265519-2266294 29 2.0
10_08_0351 - 17069974-17070232,17070470-17071751,17071908-170719... 29 2.6
09_04_0005 + 13612060-13612291,13612381-13612510,13612726-136129... 29 3.4
07_03_1616 - 28167872-28168303 28 4.5
01_03_0308 - 14883728-14884120 28 4.5
10_08_0308 + 16660751-16661450,16661656-16661819,16662615-166628... 28 6.0
08_02_0699 + 20155509-20156189 28 6.0
04_04_0825 + 28443961-28444099,28444527-28444603,28444710-284447... 28 6.0
04_04_0169 + 23266110-23266439,23267208-23267288,23267399-232675... 28 6.0
12_01_0737 - 6588612-6588922,6595261-6596602,6596639-6596749 27 7.9
08_02_1462 + 27308792-27308924,27309711-27309778,27309854-273101... 27 7.9
07_03_0543 + 19272389-19272534,19273337-19273496,19273584-192737... 27 7.9
06_03_0365 + 19918003-19918401 27 7.9
04_04_0999 - 30002433-30003279,30003384-30003513,30003620-30003758 27 7.9
04_01_0596 - 7852529-7855185,7855545-7855581 27 7.9
>03_05_0843 +
28126480-28127007,28127092-28127457,28129388-28129487,
28130266-28130546,28130643-28130705,28131276-28131431,
28131913-28132080,28132158-28132298,28132714-28132840,
28132888-28132994,28134142-28134372,28134446-28134559,
28135091-28135261
Length = 850
Score = 31.9 bits (69), Expect(2) = 9e-04
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +2
Query: 83 PGQPARGEAHLAAAVICPSDEDSKTFTINCASGDMLKLRATDARARQEWVDGLRAIAGYT 262
P +P GE HL + + S D + F+I + L LRA R WV+ L+A
Sbjct: 166 PRKPI-GEIHLKVSSVRESRSDDRRFSIFSGT-KRLHLRAETREDRAAWVEALQATKEMF 223
Query: 263 PR 268
PR
Sbjct: 224 PR 225
Score = 27.9 bits (59), Expect(2) = 9e-04
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 8 RWFAVDPETGVLSYYLYDGPGDTIQPGQPARG 103
RWFA+ GVLSYY GP + + RG
Sbjct: 106 RWFAL--HDGVLSYYKIHGPDRIVLSRETERG 135
>02_05_0512 +
29675835-29675901,29676681-29676813,29677020-29677164,
29677586-29678407
Length = 388
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/53 (30%), Positives = 19/53 (35%)
Frame = -1
Query: 280 WPPSPWCVSSNGPEPVDPLLARAGVGSSQLQHVAGRAVYGEGLGVFVAWAYHC 122
W PS WC P P RAG+ AG + G+ V W C
Sbjct: 160 WSPSRWCCPRGSRIPRSPWQIRAGIDKQGAAADAGELLSGQVKAVRKPWRSRC 212
>06_03_0226 - 18420293-18420697
Length = 134
Score = 32.3 bits (70), Expect = 0.28
Identities = 31/94 (32%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Frame = -1
Query: 424 DPCEGRENLKTLCSARGPRX*VRSLVAAAWXTP------WRRGPRAALSAAGAGWPPSPW 263
DP +G +A P +VAAA TP WRRGPR A SAAG G
Sbjct: 13 DPAQGALPRADPAAAPSPTTTTTRVVAAA-ATPTTSTCGWRRGPRPAQSAAGDGVAAGEG 71
Query: 262 CVSSNGPEPVDPLLARAGVGSSQLQHVAGRAVYG 161
V E + + G S++ +HV V G
Sbjct: 72 DVYVEELEMMKMMGIPVGFDSTKGKHVPDADVSG 105
>12_02_0528 + 20059613-20061472
Length = 619
Score = 31.5 bits (68), Expect = 0.48
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = -1
Query: 307 AALSAAGAGWP-----PSPWCVSSNGPEPVDPLLARAGVGS 200
A L A WP P+PW + G EP+ PL+ A GS
Sbjct: 25 AGLGELLAAWPSLADEPAPWYTPARGAEPLTPLMVAAVYGS 65
>11_06_0499 +
24354810-24355212,24355677-24355735,24355846-24355929,
24356040-24356337,24357026-24357203,24357686-24357746,
24358209-24358391,24358581-24358742,24358844-24359037,
24359354-24359504,24359551-24359578,24359845-24360117,
24360660-24360724
Length = 712
Score = 31.5 bits (68), Expect = 0.48
Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 331 TPWRRGPRAALSAAGAGWPPSPWCVSSNGPEPVD--PLLARAGVG 203
TP RR P AA +AA A PP P+ VSS P P L RA G
Sbjct: 21 TPRRRLPFAA-AAAAAAAPPRPFLVSSPPPPPAPRARLARRAAAG 64
>12_02_0230 + 15973390-15974645,16002878-16003097
Length = 491
Score = 30.7 bits (66), Expect = 0.85
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 79 TAWTAGQGGGSFSCSSDMPKRRRLQDLHHKLRVRRHVEA 195
TA+T G G SC S+ P++ L L H R RR EA
Sbjct: 414 TAFTTS-GNGDLSCPSNFPRKEAL--LRHAFRARRFPEA 449
>05_05_0060 -
22015440-22015481,22015572-22015709,22016704-22016799,
22016911-22017135
Length = 166
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 91 AGQGGGSFSCSSDMPKRRRLQDLHHK 168
AG+GG +D+P+ RRL+DL K
Sbjct: 48 AGEGGAEADADADLPELRRLRDLEAK 73
>03_02_0982 +
12925861-12926211,12926309-12926378,12927190-12927287,
12927467-12927615,12928083-12928198,12928521-12928617,
12929122-12929206,12929303-12929365,12929505-12929645
Length = 389
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/54 (42%), Positives = 26/54 (48%)
Frame = -1
Query: 319 RGPRAALSAAGAGWPPSPWCVSSNGPEPVDPLLARAGVGSSQLQHVAGRAVYGE 158
RGPR A SA A SPW S G +P + +R VG S H G V GE
Sbjct: 23 RGPRPAASALVAPLLASPW-EPSGGGQPHWLVPSRGHVGHSH-HHHHGEEVGGE 74
>07_01_0323 - 2264356-2264650,2265519-2266294
Length = 356
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/50 (34%), Positives = 20/50 (40%)
Frame = -1
Query: 349 VAAAWXTPWRRGPRAALSAAGAGWPPSPWCVSSNGPEPVDPLLARAGVGS 200
VA A T WRR + + G G PP V P P L G+ S
Sbjct: 55 VAVAKETGWRRDAKITVRGRGHGNPPRALVVRPLPLLPPSPFLRNRGISS 104
>10_08_0351 -
17069974-17070232,17070470-17071751,17071908-17071969,
17072109-17072181,17072399-17072466,17073023-17073207,
17073311-17073452,17073665-17073720,17074003-17074056,
17074679-17074782,17075012-17075112,17075717-17075790,
17076482-17076560,17076668-17076744,17076875-17076931,
17077058-17077168,17077254-17077334
Length = 954
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 316 GPRAALSAAGAG-WPPSPWCVSSNGPEPVDPLLARAGV 206
GP+ A + G G P P+ +S NGPE V L GV
Sbjct: 508 GPQMAKATNGLGSQEPIPYLLSKNGPENVGKFLYLEGV 545
>09_04_0005 +
13612060-13612291,13612381-13612510,13612726-13612926,
13613086-13613185,13613513-13613559,13613871-13613964,
13614042-13614192,13614777-13614923,13614994-13615067,
13615288-13615376,13615840-13615954,13616104-13616301
Length = 525
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1
Query: 304 ALSAAGAGWPPSPWCVSSNGPEPVDPLLARA 212
A++A GA WPP V S P P P A A
Sbjct: 37 AVAALGALWPPRLVAVESRPPPPSSPASASA 67
>07_03_1616 - 28167872-28168303
Length = 143
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -1
Query: 307 AALSAAGAGWPPSPWCVSSNGPEPVDPLLAR--AGVGSSQLQHVAGRAV 167
AAL+ +GA P SS P P PLLAR + SS+L R +
Sbjct: 29 AALAGSGALLPRLDGVPSSPSPSPAPPLLARSFSATSSSRLPREFSRTL 77
>01_03_0308 - 14883728-14884120
Length = 130
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 322 AMASARQQLQATELXDAALARCIESSDSPFPHTDPDLLLLKATSAA 459
AMA++R AT L + +S SPFP T P ++ + T A
Sbjct: 22 AMAASRTDTGATALPSPSPIENSTASRSPFPTTSPSMIDEQTTERA 67
>10_08_0308 +
16660751-16661450,16661656-16661819,16662615-16662800,
16663297-16663533
Length = 428
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 274 PSPWCVSSNGPEPVDPLLARAGVGS 200
P+PW + G EP+ PL+ GS
Sbjct: 144 PAPWYSLARGTEPLTPLMVATAYGS 168
>08_02_0699 + 20155509-20156189
Length = 226
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 527 DGERGVRCXRCSTPRHCSRHCM 462
D ER RC RC P H + +CM
Sbjct: 204 DMERHGRCWRCGKPGHHTSNCM 225
>04_04_0825 +
28443961-28444099,28444527-28444603,28444710-28444758,
28445283-28445367,28445506-28445755,28447053-28447373
Length = 306
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = -2
Query: 201 ALSFNMSPDAQFMVKVLESSSLGH--ITAAAK*ASPLAGCPGCIVSPG 64
+LS ++ PD + M + S S ++++++ S +G GC+V+PG
Sbjct: 247 SLSLSLGPDPKCMPAIASSPSESSCILSSSSRSFSDCSGNSGCLVAPG 294
>04_04_0169 +
23266110-23266439,23267208-23267288,23267399-23267538,
23267815-23268070
Length = 268
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = -2
Query: 303 LSRLQG--RVGPHHLGVYPAMA-LSPSTHSW 220
LSRL G R GPHH VY A A L P S+
Sbjct: 18 LSRLAGAARFGPHHCAVYAANAFLGPDLGSF 48
>12_01_0737 - 6588612-6588922,6595261-6596602,6596639-6596749
Length = 587
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = -1
Query: 331 TPWRRGPR---AALSAAGAGWPPSPWCVSSNGPEPVDPLLARAGVGSSQLQHVAGR 173
TPWR R A S AG G P + NGP VDP A ++ V GR
Sbjct: 488 TPWRLRARLSHARPSPAGRGL--LPLAMRGNGPTHVDPAEATVADKVGLVEAVCGR 541
>08_02_1462 +
27308792-27308924,27309711-27309778,27309854-27310159,
27310168-27310839
Length = 392
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2
Query: 279 GPHHLGVYPAMALSPSTHSWRARASVALSFNMSPDAQF 166
G HL V +AL P WR R +N+ D +F
Sbjct: 96 GVTHLAVGDRVALEPGISCWRCRHCKGGRYNLCEDMKF 133
>07_03_0543 +
19272389-19272534,19273337-19273496,19273584-19273741,
19273852-19273945,19274082-19274198,19275119-19275229,
19275309-19275396,19275615-19275718,19275796-19275867,
19275950-19276039,19276151-19276308,19276746-19276752,
19277140-19277194,19277273-19277421,19277543-19277664,
19277916-19278105
Length = 606
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = -1
Query: 313 PRAALSAAGAGWP---PSPWCVSSNGPEPVDPLL 221
P AA +AA A P PSP + P P+DP+L
Sbjct: 12 PEAAAAAAAASSPLRRPSPRVLREVPPPPLDPIL 45
>06_03_0365 + 19918003-19918401
Length = 132
Score = 27.5 bits (58), Expect = 7.9
Identities = 23/78 (29%), Positives = 29/78 (37%)
Frame = -1
Query: 361 VRSLVAAAWXTPWRRGPRAALSAAGAGWPPSPWCVSSNGPEPVDPLLARAGVGSSQLQHV 182
V SL A R P A A A W S P P + G+++ +
Sbjct: 18 VSSLSVRAEADQVARAPALAPDVAAASWVQQG---SQEAAAPGRPGMGMGKNGAARWRRT 74
Query: 181 AGRAVYGEGLGVFVAWAY 128
AGR G G G AWA+
Sbjct: 75 AGRRGRGGGGGGTGAWAF 92
>04_04_0999 - 30002433-30003279,30003384-30003513,30003620-30003758
Length = 371
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 134 PSDEDSKTFTINCASGDMLKLRATDARARQEWVD 235
PS S T T NC+SGD ++ ++ +E D
Sbjct: 143 PSPSSSTTTTTNCSSGDSAGEQSNTSKEEEEETD 176
>04_01_0596 - 7852529-7855185,7855545-7855581
Length = 897
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 307 LAVHDAMASARQQLQATELXDAALARCIESSDSPFPHTDPDLLLLKATSAASMQC 471
++V A AS Q TE+ +L C+ + D+ F D DL++ A +C
Sbjct: 412 ISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKC 466
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,728,887
Number of Sequences: 37544
Number of extensions: 312254
Number of successful extensions: 1441
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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