Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1429
         (628 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0234 - 26602660-26602728,26602814-26602988,26603077-266031...    45   4e-05
06_01_0356 + 2557127-2557193,2557272-2557315,2557433-2557528,255...    43   2e-04
01_06_0465 - 29573972-29574110,29574300-29574343,29574434-295746...    39   0.003
06_03_0740 - 24006485-24006629,24006821-24006864,24006954-240071...    33   0.25 
04_04_0481 - 25541355-25541849,25541933-25542535,25542730-255428...    29   4.0  
11_06_0481 + 24092574-24093962                                         28   7.0  
04_04_0496 + 25631832-25631972,25632094-25632160,25634993-256350...    28   7.0  
01_01_0103 - 773727-774737,774797-774813,774852-775078,777465-77...    27   9.2  

>05_06_0234 -
           26602660-26602728,26602814-26602988,26603077-26603120,
           26603204-26603381,26603468-26603652,26603737-26603801,
           26603985-26604066,26604342-26604434,26605096-26605191,
           26605312-26605355,26605467-26605530
          Length = 364

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 20/37 (54%), Positives = 25/37 (67%)
 Frame = +3

Query: 267 DIEAMFYSEVHALECKYXKLYKPVYEXRALIVNGTYE 377
           D+EA F+ E  ALE KY K+Y+P+Y  R  IVNG  E
Sbjct: 73  DLEAKFFEERAALEAKYQKMYEPLYSKRYEIVNGVVE 109


>06_01_0356 +
           2557127-2557193,2557272-2557315,2557433-2557528,
           2559259-2559351,2559450-2559540,2559617-2559678,
           2559754-2559938,2560022-2560199,2560293-2560336,
           2560440-2560635,2560728-2560745,2560955-2561005
          Length = 374

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 20/37 (54%), Positives = 24/37 (64%)
 Frame = +3

Query: 267 DIEAMFYSEVHALECKYXKLYKPVYEXRALIVNGTYE 377
           +IE  F+ E  ALE KY KLY+P+Y  R  IVNG  E
Sbjct: 74  EIELKFFEERAALEAKYQKLYEPLYTKRYNIVNGVVE 110


>01_06_0465 -
           29573972-29574110,29574300-29574343,29574434-29574602,
           29574707-29574894,29575081-29575145,29575257-29575311,
           29575502-29575594,29576035-29576130,29576259-29576302,
           29576419-29576431
          Length = 301

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +3

Query: 267 DIEAMFYSEVHALECKYXKLYKPVYEXRALIVNGTYE 377
           ++EA F  E  ALE  Y KLY P+Y  R+ IV+G  E
Sbjct: 56  ELEAKFLEEKAALEANYQKLYGPLYSKRSEIVSGVLE 92


>06_03_0740 -
           24006485-24006629,24006821-24006864,24006954-24007122,
           24007226-24007413,24007572-24007634,24007992-24008084,
           24009837-24009932,24010024-24010067,24010184-24010357,
           24010764-24010974
          Length = 408

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3

Query: 267 DIEAMFYSEVHALECKYXKLYKPVY 341
           ++E  F+ E  ALE KY KLY P+Y
Sbjct: 180 ELEVKFFEEKAALEAKYQKLYGPLY 204


>04_04_0481 -
           25541355-25541849,25541933-25542535,25542730-25542837,
           25542925-25543260,25543391-25543461,25543692-25543824
          Length = 581

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -3

Query: 164 IISLRVTATFQQVLR*FTTSEDFFFFCRLHFGCVVV 57
           + +L VT TF  + +   TS  FF FC + F  +VV
Sbjct: 499 VSNLIVTQTFLSLTKALGTSATFFLFCAVSFFALVV 534


>11_06_0481 + 24092574-24093962
          Length = 462

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = -2

Query: 174 DGRYHFITGHSHFSTGVAVVHHFRGLLLLLQTPFRMCGRHQNVRRYPYLIFHS 16
           DG   F+  H +   G +V HH  GLLL       +C  +   +R+  L  H+
Sbjct: 116 DGVLDFMPEHRYSGDGWSVSHHCNGLLLFSNCSRWLCVCNLATQRWEKLPDHA 168


>04_04_0496 +
           25631832-25631972,25632094-25632160,25634993-25635054,
           25636173-25636248,25636355-25636429,25637768-25637825,
           25637955-25638207,25639030-25639037,25639159-25639411,
           25639503-25639605,25639750-25639852,25639947-25640160
          Length = 470

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +3

Query: 237 LLENSSXEFVDIEAMFYSEVHALECKYXKLYKPVYEXRALI 359
           LL+N+  +F+ I    Y+ ++A +C Y       YE  AL+
Sbjct: 279 LLQNNKVDFIGIN--HYTAIYAKDCIYSPCTLDTYEGNALV 317


>01_01_0103 -
           773727-774737,774797-774813,774852-775078,777465-778237
          Length = 675

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 540 WYNIFXNCLNASAXVMHEHDEPI 608
           W+ +   CLN S  +   HD P+
Sbjct: 245 WFGLIKKCLNKSVSLADSHDNPL 267


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,397,891
Number of Sequences: 37544
Number of extensions: 239092
Number of successful extensions: 419
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 419
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)