BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1428
(598 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin b... 25 1.9
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 24 3.2
DQ437579-1|ABD96049.1| 575|Anopheles gambiae short neuropeptide... 24 4.3
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 24 4.3
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 24 4.3
AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant r... 24 4.3
CR954257-15|CAJ14166.1| 271|Anopheles gambiae predicted protein... 23 5.7
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 23 7.5
AJ237706-1|CAB40347.1| 570|Anopheles gambiae putative 5'-nucleo... 23 7.5
AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl c... 23 7.5
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 23 7.5
>AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin
binding protein protein.
Length = 568
Score = 25.0 bits (52), Expect = 1.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 3 RTRRLRPNSLKKHRRRRKDPVAAKPRRRSGPKEKF 107
R RR RP ++H RRR P A + + PKE +
Sbjct: 332 RHRRRRPPPRRRHDRRRY-PTNAGHKVMNAPKEYY 365
Score = 24.6 bits (51), Expect = 2.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 21 PNSLKKHRRRRKDPVAAKPRRR 86
P + ++HRRRR P RRR
Sbjct: 327 PGAAERHRRRRPPPRRRHDRRR 348
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 24.2 bits (50), Expect = 3.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 45 RRRKDPVAAKPRRRSGPKEKFVTS*TTRCCLINPHMRNCTRK 170
RRR+ +A RRR P+ + TTR P R T++
Sbjct: 492 RRRRRAIARARRRRCRPRARRNPPATTRPVRHRPTRRKSTKR 533
>DQ437579-1|ABD96049.1| 575|Anopheles gambiae short neuropeptide F
receptor protein.
Length = 575
Score = 23.8 bits (49), Expect = 4.3
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 521 FLWFQ*NFRESFKRNIFCF 577
+ W NFR+ FK+ + CF
Sbjct: 380 YAWLNDNFRKEFKQVLPCF 398
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 23.8 bits (49), Expect = 4.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 506 LWRMLSSPEALIPIIXEIKKTHTDTIVAAIFPR 408
L+R+L L +I E+K + ++ + IFPR
Sbjct: 705 LYRLLKKYTGLRNLIRELKSEYGNSKIYPIFPR 737
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 23.8 bits (49), Expect = 4.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 506 LWRMLSSPEALIPIIXEIKKTHTDTIVAAIFPR 408
L+R+L L +I E+K + ++ + IFPR
Sbjct: 705 LYRLLKKYTGLRNLIRELKSEYGNSKIYPIFPR 737
>AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant
receptor Or3 protein.
Length = 411
Score = 23.8 bits (49), Expect = 4.3
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 175 WDFLVQFLICGFIKQHLVVQL-VTNFS 98
W F VQF+ C I L++ + VT FS
Sbjct: 284 WVFFVQFIQCTMIWCSLILYIAVTGFS 310
>CR954257-15|CAJ14166.1| 271|Anopheles gambiae predicted protein
protein.
Length = 271
Score = 23.4 bits (48), Expect = 5.7
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 18 RPNSLKKHRRR-RKDPVAAKPRRRSGPKEKFVTS 116
+PN L++ K+PV KP+ P+ + VT+
Sbjct: 124 KPNDLQQEGETLNKEPVETKPQESEPPEMQEVTA 157
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 23.0 bits (47), Expect = 7.5
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -2
Query: 588 KGQEKQKIFLLKDSRKFYWNQRNLTTQTMEDA 493
KG+E Q+ F L+ + ++++ TQT+ A
Sbjct: 196 KGREMQRQFRLEQEQLQQMRKQSVDTQTLSQA 227
>AJ237706-1|CAB40347.1| 570|Anopheles gambiae putative
5'-nucleotidase protein.
Length = 570
Score = 23.0 bits (47), Expect = 7.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 488 SPEALIPIIXEIKKTHTDTIVA 423
SP+ L P + E++K T+VA
Sbjct: 132 SPKGLAPYLAELEKMKIPTVVA 153
>AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl
cyclase beta subunit protein.
Length = 649
Score = 23.0 bits (47), Expect = 7.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 4 GREGFGQTASKNTEEEGRIR 63
G GFGQ + NT+ EG ++
Sbjct: 505 GIVGFGQYCAANTDPEGAMK 524
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 23.0 bits (47), Expect = 7.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 1 EGREGFGQTASKNTEEEGRIRWRQSQEEEVVQ 96
EGRE + + RIR Q++EVV+
Sbjct: 1101 EGRESAHPERREQVRPQRRIRQHMPQQKEVVE 1132
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,617
Number of Sequences: 2352
Number of extensions: 11739
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -