Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1427
         (587 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   3.9  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   5.1  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   6.8  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    21   9.0  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 13/56 (23%), Positives = 24/56 (42%)
 Frame = -3

Query: 546 VRSLRETSTVLF*SLNLTFFVVLTEYTYTFIYNLIKHH*RASVKKFLNLRSLFKFS 379
           ++ L  T    F  + + F   + +Y Y  + +++  H R  +    NL    KFS
Sbjct: 55  IQVLGVTEKEFFDQMGVHFVGFVGQYGYDRVLSVLGRHVRDFLNGLDNLHEYLKFS 110


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 395 LCLNLVKIYATLPLRL 348
           L L L  ++ATLPLRL
Sbjct: 136 LLLMLYLLFATLPLRL 151


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 504 LNLTFFVVLTEYTYTFIYNLI 442
           +++TF V++   T  + +NLI
Sbjct: 219 IDITFVVIIRRRTLYYFFNLI 239


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -2

Query: 232 LQCLEMCEFERCEVSDAISIWXQRAES 152
           L C E C F++    D  ++  ++ ES
Sbjct: 52  LGCFEACVFQKLHFMDGNTLNVEKLES 78


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,060
Number of Sequences: 438
Number of extensions: 1887
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)