Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1421
         (633 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U30943-1|AAC47116.1|  192|Caenorhabditis elegans cyclophilin-1 p...    31   0.91 
AL033512-4|CAA22075.1|  192|Caenorhabditis elegans Hypothetical ...    31   0.91 
AC025715-3|AAU87815.1|  534|Caenorhabditis elegans Hypothetical ...    28   4.8  
Z36948-2|CAA85410.1|  268|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U27559-1|AAC47125.1|  171|Caenorhabditis elegans cyclophilin pro...    27   8.4  
AL032663-1|CAA21760.1|  171|Caenorhabditis elegans Hypothetical ...    27   8.4  

>U30943-1|AAC47116.1|  192|Caenorhabditis elegans cyclophilin-1
           protein.
          Length = 192

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 187 ENFKAFCEIESGFPAKDITLHFKANHF 267
           ENF+A C  E G   + + LHFK + F
Sbjct: 52  ENFRALCTGEKGVGEQGVALHFKGSKF 78


>AL033512-4|CAA22075.1|  192|Caenorhabditis elegans Hypothetical
           protein Y49A3A.5 protein.
          Length = 192

 Score = 30.7 bits (66), Expect = 0.91
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 187 ENFKAFCEIESGFPAKDITLHFKANHF 267
           ENF+A C  E G   + + LHFK + F
Sbjct: 52  ENFRALCTGEKGVGEQGVALHFKGSKF 78


>AC025715-3|AAU87815.1|  534|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.5 protein.
          Length = 534

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
 Frame = +3

Query: 261 PLLNNKKSLKEHGVHDGDVIILLHMVNSAQNLSVNDSSQALPSGIASLDFSNIQVPTTSA 440
           P++ NKK +K+        + L  M  +A  +  N S +  P   + + +   +V     
Sbjct: 118 PIMKNKKIVKQL---QHSFLCLAGMRLAA--VGPNPSVKRFPGATSEMYYVARRVHLYDT 172

Query: 441 NTSM---ASRNTPVEEDPRIIREMFLLTQ----INWHYLNRIIQDLPMLY 569
           +TS    A  N  +EE   +  E  L T+    + WH+L  I+Q  P+ Y
Sbjct: 173 STSAKGYACVNPSIEEGEYVKYEYELATRHDIIMYWHHLRAIVQSTPLTY 222


>Z36948-2|CAA85410.1|  268|Caenorhabditis elegans Hypothetical
           protein D2089.3 protein.
          Length = 268

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 369 SSQALPSGIASLDFSNIQVPTTSAN-TSMASRNTPVEEDPRI 491
           SS +LPS    +  +  Q P+TS N T++ S   P   DP I
Sbjct: 119 SSNSLPSDFPDISMNEPQQPSTSENATAVTSEEQPQLIDPFI 160


>U27559-1|AAC47125.1|  171|Caenorhabditis elegans cyclophilin
           protein.
          Length = 171

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 187 ENFKAFCEIESGFPAKDITLHFKANHF 267
           ENF+A C  E G       LHFK + F
Sbjct: 34  ENFRALCTGEKGVGKSGKPLHFKGSKF 60


>AL032663-1|CAA21760.1|  171|Caenorhabditis elegans Hypothetical
           protein Y75B12B.2 protein.
          Length = 171

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 187 ENFKAFCEIESGFPAKDITLHFKANHF 267
           ENF+A C  E G       LHFK + F
Sbjct: 34  ENFRALCTGEKGVGKSGKPLHFKGSKF 60


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,078,187
Number of Sequences: 27780
Number of extensions: 276117
Number of successful extensions: 724
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)