Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1419
         (309 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1752 + 39659914-39659942,39660195-39660306,39660348-396605...    27   4.0  
05_01_0061 - 422914-423027,423114-423149,423250-423324,423412-42...    25   9.2  

>01_06_1752 +
           39659914-39659942,39660195-39660306,39660348-39660533,
           39660918-39661022,39661147-39661230,39661416-39661531,
           39661636-39661737,39661816-39661929,39662323-39662389,
           39662457-39662510,39662899-39662973,39663057-39663092,
           39663490-39663591
          Length = 393

 Score = 26.6 bits (56), Expect = 4.0
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 256 TSWQGIRSRCRK 221
           T W+G+R+RCRK
Sbjct: 356 TPWEGVRARCRK 367


>05_01_0061 -
           422914-423027,423114-423149,423250-423324,423412-423465,
           423554-423620,423912-424025,424114-424215,424220-424269,
           424380-424424,424559-424642,424996-425100,425300-425443,
           425535-425643,425738-425766
          Length = 375

 Score = 25.4 bits (53), Expect = 9.2
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = -3

Query: 253 SWQGIRSRCRK 221
           +W+G+R+RCRK
Sbjct: 335 AWEGVRARCRK 345


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,263,456
Number of Sequences: 37544
Number of extensions: 92042
Number of successful extensions: 170
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)