Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1417
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 33 0.19
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 33 0.19
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 33 0.19
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 30 1.8
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 30 1.8
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 30 1.8
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 30 1.8
AC025726-18|AAK73910.1| 996|Caenorhabditis elegans Hypothetical... 30 1.8
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 30 1.8
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 28 5.4
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 28 5.4
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 28 5.4
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 28 7.1
U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical pr... 28 7.1
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 470 NANQRIERGIGGNKMTLREKNEQQQEYRLKYLQAQQEVEELKRQLDGIE 616
+A Q +E+ + L E E+ + + +AQQEVE LK+ ++ ++
Sbjct: 917 SARQEVEKSLNDANDRLSEHEEKNADLEKQRRKAQQEVENLKKSIEAVD 965
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 470 NANQRIERGIGGNKMTLREKNEQQQEYRLKYLQAQQEVEELKRQLDGIE 616
+A Q +E+ + L E E+ + + +AQQEVE LK+ ++ ++
Sbjct: 917 SARQEVEKSLNDANDRLSEHEEKNADLEKQRRKAQQEVENLKKSIEAVD 965
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 470 NANQRIERGIGGNKMTLREKNEQQQEYRLKYLQAQQEVEELKRQLDGIE 616
+A Q +E+ + L E E+ + + +AQQEVE LK+ ++ ++
Sbjct: 917 SARQEVEKSLNDANDRLSEHEEKNADLEKQRRKAQQEVENLKKSIEAVD 965
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 79 LQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQ 180
L +L D++GE+ +I +I+ ++R + ++ K+Q
Sbjct: 9 LSTELADLDGEIGQIDQQISQLRRKKSELTQKRQ 42
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 79 LQKQLGDMEGEVKEIQMEIAAIKRDRLDVMTKKQ 180
L +L D++GE+ +I +I+ ++R + ++ K+Q
Sbjct: 32 LSTELADLDGEIGQIDQQISQLRRKKSELTQKRQ 65
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 467 ENANQRIERGIGGNKMTLREKNEQQQEYRLKYLQAQQEV 583
E+ ++ +RG GG T+R+KNEQ+ E K L +E+
Sbjct: 161 ESRSKSSDRGGGGIYGTMRKKNEQKLEELRKKLHTDEEL 199
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 521 REKNEQQQEYRL--KYLQAQQEVEELKRQLDGIE 616
REK+EQ Q +L K Q Q EL RQ+ GIE
Sbjct: 221 REKHEQAQRQQLLQKVAQNQAHESELARQIQGIE 254
>AC025726-18|AAK73910.1| 996|Caenorhabditis elegans Hypothetical
protein Y71G12B.11b protein.
Length = 996
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 467 ENANQRIERGIGGNKMTLREKNEQQQEYRLKYLQAQQEV 583
E+ ++ +RG GG T+R+KNEQ+ E K L +E+
Sbjct: 161 ESRSKSSDRGGGGIYGTMRKKNEQKLEELRKKLHTDEEL 199
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 467 ENANQRIERGIGGNKMTLREKNEQQQEYRLKYLQAQQEV 583
E+ ++ +RG GG T+R+KNEQ+ E K L +E+
Sbjct: 161 ESRSKSSDRGGGGIYGTMRKKNEQKLEELRKKLHTDEEL 199
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +2
Query: 413 NSWT*RISEIYRKRGGGFENANQRIERGIGGNKMTLREKNE--QQQEYRLKYLQAQQE-- 580
N W ++S K G + RI G G LR +N +QE+ + +E
Sbjct: 467 NVWEAKMSNGLVK-GHAYSITGCRIVDGPNGQTCILRIRNPWGNEQEWNGPWSDNSREWR 525
Query: 581 -VEELKRQLDGIEFDNQASFWIKF 649
V + +Q G++FD+ FW+ F
Sbjct: 526 SVPDSVKQDMGLKFDHDGEFWMSF 549
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +2
Query: 413 NSWT*RISEIYRKRGGGFENANQRIERGIGGNKMTLREKNE--QQQEYRLKYLQAQQE-- 580
N W ++S K G + RI G G LR +N +QE+ + +E
Sbjct: 492 NVWEAKMSNGLVK-GHAYSITGCRIVDGPNGQTCILRIRNPWGNEQEWNGPWSDNSREWR 550
Query: 581 -VEELKRQLDGIEFDNQASFWIKF 649
V + +Q G++FD+ FW+ F
Sbjct: 551 SVPDSVKQDMGLKFDHDGEFWMSF 574
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +2
Query: 413 NSWT*RISEIYRKRGGGFENANQRIERGIGGNKMTLREKNE--QQQEYRLKYLQAQQE-- 580
N W ++S K G + RI G G LR +N +QE+ + +E
Sbjct: 513 NVWEAKMSNGLVK-GHAYSITGCRIVDGPNGQTCILRIRNPWGNEQEWNGPWSDNSREWR 571
Query: 581 -VEELKRQLDGIEFDNQASFWIKF 649
V + +Q G++FD+ FW+ F
Sbjct: 572 SVPDSVKQDMGLKFDHDGEFWMSF 595
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/47 (23%), Positives = 27/47 (57%)
Frame = +2
Query: 491 RGIGGNKMTLREKNEQQQEYRLKYLQAQQEVEELKRQLDGIEFDNQA 631
+G+ ++ ++ +Q Q+Y+ + LQ QQ+ +++Q ++ QA
Sbjct: 505 QGLSMQQIAAIQQQQQHQQYQQRILQQQQQQAMMQQQQQQVQQQQQA 551
>U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical
protein W05H9.1 protein.
Length = 414
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = +2
Query: 509 KMTLREKNEQQQEYRLKYLQA----QQEVEELKRQLD 607
K EK Q+QE K+ QA QQ+ EELK+Q+D
Sbjct: 146 KQKQEEKEAQRQEQIEKWKQASEKLQQQREELKQQID 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,362,956
Number of Sequences: 27780
Number of extensions: 282712
Number of successful extensions: 1249
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1240
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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