Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1413
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81475-8|CAL90887.1|  676|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z81475-7|CAB03914.2|  653|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical...    27   8.7  

>Z81475-8|CAL90887.1|  676|Caenorhabditis elegans Hypothetical
           protein C24H11.8b protein.
          Length = 676

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 394 VRPPXADSVVLPPHRRCSDARRQPXGT 474
           V+PP  D++ LP  R+ S   R P GT
Sbjct: 265 VQPPRFDTMSLPGRRKISTQSRSPNGT 291


>Z81475-7|CAB03914.2|  653|Caenorhabditis elegans Hypothetical
           protein C24H11.8a protein.
          Length = 653

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 394 VRPPXADSVVLPPHRRCSDARRQPXGT 474
           V+PP  D++ LP  R+ S   R P GT
Sbjct: 265 VQPPRFDTMSLPGRRKISTQSRSPNGT 291


>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.31 protein.
          Length = 1219

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 49  IKLCDCRINVCRWLLHDTIVEMLSSGTCCVHECSQ 153
           I+ C+  ++ CRW L +  V   S+ +C   EC+Q
Sbjct: 499 IRRCES-VDECRWHLGELRVRCASTASCQREECAQ 532


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,104,585
Number of Sequences: 27780
Number of extensions: 239848
Number of successful extensions: 442
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)