Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS1411
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81119-2|CAB03332.1|  350|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z81147-10|CAB03533.3|  671|Caenorhabditis elegans Hypothetical p...    29   3.2  
U70850-3|AAB09122.3|  596|Caenorhabditis elegans Zinc finger plu...    29   3.2  
AY289599-1|AAP43944.1|  596|Caenorhabditis elegans ZAG-1 protein.      29   3.2  
AY224511-1|AAP37457.1|  596|Caenorhabditis elegans ZAG-1 protein.      29   3.2  
Z81147-4|CAB03529.1|  578|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z78198-2|CAB01567.1|  296|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z81147-5|CAB03534.1|  663|Caenorhabditis elegans Hypothetical pr...    27   9.7  
CU457741-7|CAM36348.1|  710|Caenorhabditis elegans Hypothetical ...    27   9.7  

>Z81119-2|CAB03332.1|  350|Caenorhabditis elegans Hypothetical
           protein T10H4.3 protein.
          Length = 350

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +1

Query: 436 ENNFSQTKQRLFLTILLGFYFTILQHMNI*KLLLQLLIEFMDPLFS*QQD 585
           ++NF  T Q  F+ I++ F+ T+L  M    LLLQL +     + S Q D
Sbjct: 190 QSNFDLTNQLCFIEIIIRFFQTLLYPMLTLTLLLQLHMIKKKRIISSQND 239


>Z81147-10|CAB03533.3|  671|Caenorhabditis elegans Hypothetical
           protein T09E11.4 protein.
          Length = 671

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +3

Query: 426 LIDRK*LLTNKTKIIFNYFIRILFYYFTAYEYI 524
           LID + LL NKT   F YF    F YFTA  ++
Sbjct: 619 LIDYEPLLFNKTTNRFEYFDSRGFLYFTAVNHL 651


>U70850-3|AAB09122.3|  596|Caenorhabditis elegans Zinc finger plus
           homeodomain, axonguidance protein 1 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 331 PSRITPFNPFQIPLLNTIIL 390
           PS +TPFNP+Q+ +   I+L
Sbjct: 82  PSMVTPFNPYQLMMYRNIML 101


>AY289599-1|AAP43944.1|  596|Caenorhabditis elegans ZAG-1 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 331 PSRITPFNPFQIPLLNTIIL 390
           PS +TPFNP+Q+ +   I+L
Sbjct: 82  PSMVTPFNPYQLMMYRNIML 101


>AY224511-1|AAP37457.1|  596|Caenorhabditis elegans ZAG-1 protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +1

Query: 331 PSRITPFNPFQIPLLNTIIL 390
           PS +TPFNP+Q+ +   I+L
Sbjct: 82  PSMVTPFNPYQLMMYRNIML 101


>Z81147-4|CAB03529.1|  578|Caenorhabditis elegans Hypothetical
           protein T09E11.5 protein.
          Length = 578

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 426 LIDRK*LLTNKTKIIFNYFIRILFYYFTAYEYIEA 530
           LID + LL NKT   F +F    F YFT   ++ A
Sbjct: 526 LIDYEPLLFNKTSNRFEFFDSRGFLYFTVINHLSA 560


>Z78198-2|CAB01567.1|  296|Caenorhabditis elegans Hypothetical
           protein F55C5.2 protein.
          Length = 296

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 583 PVAMKKVDP*ILSAIVKEASIYSYA 509
           P  +KK+DP I++ I  + S YSY+
Sbjct: 170 PWRLKKIDPKIITGITVDRSYYSYS 194


>Z81147-5|CAB03534.1|  663|Caenorhabditis elegans Hypothetical
           protein T09E11.7 protein.
          Length = 663

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 426 LIDRK*LLTNKTKIIFNYFIRILFYYFTAYEYIEA 530
           LID + LL NKT   F +F    F YFT   ++ A
Sbjct: 611 LIDYEPLLFNKTSNRFEFFDSRGFLYFTIVNHLSA 645


>CU457741-7|CAM36348.1|  710|Caenorhabditis elegans Hypothetical
           protein C42C1.7 protein.
          Length = 710

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 426 LIDRK*LLTNKTKIIFNYFIRILFYYFTAYEYIEA 530
           +ID + LL NKT   F +F    F YFT   ++ A
Sbjct: 658 MIDYEPLLFNKTSNRFEFFDNRGFLYFTGVNHLSA 692


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,775,778
Number of Sequences: 27780
Number of extensions: 163153
Number of successful extensions: 332
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)