BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS1409
(665 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 40 7e-05
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 26 0.93
CR954256-10|CAJ14151.1| 548|Anopheles gambiae putative alkaline... 24 5.0
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 39.9 bits (89), Expect = 7e-05
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +1
Query: 379 EPTLLGIKDMGFITMTEIQAKAIPPLLEGXDLVGAAKTGSGKTQHS*YPAI----DLIYK 546
E + ++ + T IQ AIP +L G DL+ A+TGSGKT P I D
Sbjct: 183 EEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTAAFMLPMIHHLLDKEDS 242
Query: 547 LKFXPRNGTGVIILXPT 597
L+ RN ++I+ PT
Sbjct: 243 LELRTRN-PYIVIVAPT 258
>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
protein I protein.
Length = 1340
Score = 26.2 bits (55), Expect = 0.93
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 486 QNWLWKNTAFLIPGYRPYIQ-IKIXTKKWY 572
++WLWKN + G R I+ + T WY
Sbjct: 631 ESWLWKNVSIGRSGSRKLIEVVPDTTTSWY 660
>CR954256-10|CAJ14151.1| 548|Anopheles gambiae putative alkaline
phosphatase protein.
Length = 548
Score = 23.8 bits (49), Expect = 5.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +3
Query: 570 YWSHHFXTHRELSMQTFGVLMELMKYHHHT 659
+W HH HR +Q L+E H T
Sbjct: 298 HWQHHHSHHRSAYVQNRVQLLETNTAHGET 327
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,318
Number of Sequences: 2352
Number of extensions: 8810
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -